RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 MPV17P39210 176 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 SLC15A1P46059 708 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 SLC6A9P48067 706 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 CX3CR1P49238 355 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 GRB2P62993 217 aaKnown RBP11.34□□□□□ -0.59
GTF3A-209ENST00000640289 CDK5R2Q13319 367 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 AGAP6Q5VW22 663 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 C11orf71Q6IPW1 123 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 LAIR2Q6ISS4 152 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 ZNF322Q6U7Q0 402 aaPredicted RBP11.34□□□□□ -0.59
GTF3A-209ENST00000640289 THAP5Q7Z6K1 395 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 KRT77Q7Z794 578 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 CDH24Q86UP0 819 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.34□□□□□ -0.59
GTF3A-209ENST00000640289 MARS2Q96GW9 593 aaKnown RBP11.34□□□□□ -0.59
GTF3A-209ENST00000640289 C1QTNF5Q9BXJ0 243 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 PLK3Q9H4B4 646 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 CBLN4Q9NTU7 201 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 DUSP13Q9UII6 198 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 IKZF2Q9UKS7 526 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 EXOGQ9Y2C4 368 aaKnown RBP11.34□□□□□ -0.59
GTF3A-209ENST00000640289 LRP12Q9Y561 859 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 N6AMT1Q9Y5N5 214 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 TMEM14AQ9Y6G1 99 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 HSPE1-MOB4S4R3N1 261 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 RAI1Q7Z5J4 1906 aaPredicted RBP11.34□□□□□ -0.59
GTF3A-209ENST00000640289 CADP27708 2225 aa11.33□□□□□ -0.59
GTF3A-209ENST00000640289 J3QRE1 110 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 LCATP04180 440 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 OR2T7P0C7T2 308 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF250P15622 560 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 DNASE1P24855 282 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 RGS6P49758 472 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF85Q03923 595 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 SWI5Q1ZZU3 235 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 SNAI3Q3KNW1 292 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 TMEM255AQ5JRV8 349 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 KCTD18Q6PI47 426 aaPredicted RBP11.33□□□□□ -0.6
GTF3A-209ENST00000640289 COLCA1Q6ZS62 124 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 RHOUQ7L0Q8 258 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 OR2T27Q8NH04 317 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 SYNPRQ8TBG9 265 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 KLF14Q8TD94 323 aaPredicted RBP11.33□□□□□ -0.6
GTF3A-209ENST00000640289 FBLIM1Q8WUP2 373 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 IPCEF1Q8WWN9 437 aaPredicted RBP11.33□□□□□ -0.6
GTF3A-209ENST00000640289 ASB17Q8WXJ9 295 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 APOBEC3DQ96AK3 386 aaPredicted RBP11.33□□□□□ -0.6
GTF3A-209ENST00000640289 OR8B4Q96RC9 309 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 MNTQ99583 582 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 DOK1Q99704 481 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 RHNO1Q9BSD3 238 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 BRD7Q9NPI1 651 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 PTTG3PQ9NZH4 202 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 MYRFQ9Y2G1 1151 aa11.33□□□□□ -0.6
GTF3A-209ENST00000640289 RPL36Q9Y3U8 105 aaKnown RBP11.33□□□□□ -0.6
GTF3A-209ENST00000640289 CELSR2Q9HCU4 2923 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 VSTM5A8MXK1 200 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 B9A039 149 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 PHYHO14832 338 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 XPNPEP2O43895 674 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 ADRA2AP08913 450 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 GCH1P30793 250 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 HSPA13P48723 471 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 PRSS12P56730 875 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF121P58317 390 aaPredicted RBP11.32□□□□□ -0.6
GTF3A-209ENST00000640289 ROM1Q03395 351 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 HLXQ14774 488 aaPredicted RBP11.32□□□□□ -0.6
GTF3A-209ENST00000640289 EFNB3Q15768 340 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 SNCBQ16143 134 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 ALKBH6Q3KRA9 238 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF718Q3SXZ3 478 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 DRAM2Q6UX65 266 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 UNQ6126/PRO20091Q6UXV3 157 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 PLEKHG7Q6ZR37 379 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF679Q8IYX0 411 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 OR52I1Q8NGK6 324 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 CACNG6Q9BXT2 260 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 MROQ9BYG7 248 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 ANKRD60Q9BZ19 345 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 MRM2Q9UI43 246 aaKnown RBP11.32□□□□□ -0.6
GTF3A-209ENST00000640289 CRYBG3Q68DQ2 2970 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 UNC79Q9P2D8 2635 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 ABCA4P78363 2273 aa11.32□□□□□ -0.6
GTF3A-209ENST00000640289 HRNRQ86YZ3 2850 aaPredicted RBP11.31□□□□□ -0.6
GTF3A-209ENST00000640289 DCHS2Q6V1P9 2916 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 IGLV3-9A0A075B6K5 115 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 DAPL1A0PJW8 107 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 J3QW42 95 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 OVOL3O00110 214 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 TBX1O43435 398 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 ANXA2P07355 339 aaKnown RBP11.31□□□□□ -0.6
GTF3A-209ENST00000640289 MYF6P23409 242 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 ALDH3B1P43353 468 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 KLF3P57682 345 aaPredicted RBP11.31□□□□□ -0.6
GTF3A-209ENST00000640289 EGR3Q06889 387 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 RAB40BQ12829 278 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 ZNF684Q5T5D7 378 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 MBNL2Q5VZF2 373 aaKnown RBP11.31□□□□□ -0.6
GTF3A-209ENST00000640289 DEGS2Q6QHC5 323 aa11.31□□□□□ -0.6
GTF3A-209ENST00000640289 FAM57BQ71RH2 274 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms