RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 EXOGQ9Y2C4 368 aaKnown RBP13.01□□□□□ -0.33
SCARB2-216ENST00000639300 LRP12Q9Y561 859 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 IGKV1-8A0A0C4DH67 115 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 OR6C76A6NM76 312 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 KRBOX1C9JBD0 128 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 SLC17A2O00624 439 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 C17orf107Q6ZR85 190 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 PRSS35Q8N3Z0 413 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 RNF128Q8TEB7 428 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 ANKRD9Q96BM1 317 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-216ENST00000639300 CCDC74BQ96LY2 380 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 UNKLQ9H9P5 680 aaKnown RBP13.01□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF814B7Z6K7 855 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF587BE7ETH6 402 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 IFNA1P01562 189 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 PEBP1P30086 187 aaKnown RBP13□□□□□ -0.33
SCARB2-216ENST00000639300 HRH1P35367 487 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 GUSBP11Q6P575 273 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 PXT1Q8NFP0 134 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 MARCH1Q8TCQ1 289 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 AKAP6Q13023 2319 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 A0A096LPE4 126 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 A0A1W2PPZ6 126 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 OR5H14A6NHG9 310 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 EFSO43281 561 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 SNRPNP63162 240 aaKnown RBP13□□□□□ -0.33
SCARB2-216ENST00000639300 EXOSC2Q13868 293 aaKnown RBP13□□□□□ -0.33
SCARB2-216ENST00000639300 TOMM34Q15785 309 aaPredicted RBP13□□□□□ -0.33
SCARB2-216ENST00000639300 TIGD3Q6B0B8 471 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 OR4D9Q8NGE8 314 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 SDSLQ96GA7 329 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF764Q96H86 408 aaPredicted RBP13□□□□□ -0.33
SCARB2-216ENST00000639300 MRGPRX4Q96LA9 322 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 GNRHR2Q96P88 292 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 A0A1W2PQF6 199 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 XRCC3O43542 346 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 IGHEP01854 428 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 RPL23AP62750 156 aaKnown RBP13□□□□□ -0.33
SCARB2-216ENST00000639300 ETFDHQ16134 617 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 WDR89Q96FK6 387 aaPredicted RBP13□□□□□ -0.33
SCARB2-216ENST00000639300 C1QTNF6Q9BXI9 259 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 LUZP4Q9P127 313 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 PIGBOS1A0A0B4J2F0 54 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 PLSCR5A0PG75 271 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 OR4E1P0C645 316 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 IRF2P14316 349 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF121P58317 390 aaPredicted RBP13□□□□□ -0.33
SCARB2-216ENST00000639300 MFGE8Q08431 387 aaPredicted RBP13□□□□□ -0.33
SCARB2-216ENST00000639300 AADACL3Q5VUY0 350 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 TMEM217Q8N7C4 229 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 OR10G3Q8NGC4 313 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 PPP1R35Q8TAP8 253 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 UPRTQ96BW1 309 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 C4orf45Q96LM5 186 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 OXGR1Q96P68 337 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 NMNAT2Q9BZQ4 307 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 MIXL1Q9H2W2 232 aa13□□□□□ -0.33
SCARB2-216ENST00000639300 IGHV1OR15-9A0A0B4J2B8 117 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 CYR61O00622 381 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 TOR1AO14656 332 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 NXPH3O95157 252 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 MPZL1O95297 269 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 CTLA4P16410 223 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 SERPINF1P36955 418 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 MYBPHQ13203 477 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF169Q14929 603 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-216ENST00000639300 ABCA7Q8IZY2 2146 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 FAM213BQ8TBF2 198 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 TINAGL1Q9GZM7 467 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-216ENST00000639300 CASP8AP2Q9UKL3 1982 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 A0A1B0GUH1 482 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 RBP2P50120 134 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF136P52737 540 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 SVBPQ8N300 66 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 OR2I1PQ8NGU4 316 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 SCARB1Q8WTV0 552 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 TTC9Q92623 222 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 S100PBPQ96BU1 408 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 SPACA9Q96E40 222 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-216ENST00000639300 TRMT61AQ96FX7 289 aaKnown RBP12.99□□□□□ -0.33
SCARB2-216ENST00000639300 VSTM2LQ96N03 204 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 DUSP13Q9UII6 198 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 ARF1P84077 181 aaKnown RBP12.99□□□□□ -0.33
SCARB2-216ENST00000639300 IRF3Q14653 427 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 HLA-BQ31612 363 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 WDR88Q6ZMY6 472 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 ABI3BPQ7Z7G0 1075 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 SGK3Q96BR1 496 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 OR5V1Q9UGF6 321 aa12.99□□□□□ -0.33
SCARB2-216ENST00000639300 SPTAN1Q13813 2472 aaKnown RBP12.98□□□□□ -0.33
SCARB2-216ENST00000639300 BHLHE40O14503 412 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 DHHO43323 396 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 HOXC4P09017 264 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-216ENST00000639300 FAHP16930 419 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 GABRA2P47869 451 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF85Q03923 595 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 KMT5CQ86Y97 462 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 TMED6Q8WW62 240 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 ALKBH3Q96Q83 286 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-216ENST00000639300 ARID2Q68CP9 1835 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms