RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MMP7P09237 267 aaPredicted RBP13.44□□□□□ -0.26
CLN6-219ENST00000637329 OCM2P0CE71 109 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 ZNF32P17041 273 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 CRYGSP22914 178 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 SDC2P34741 201 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 RPS19P39019 145 aaKnown RBP13.44□□□□□ -0.26
CLN6-219ENST00000637329 KIR2DL2P43627 348 aaPredicted RBP13.44□□□□□ -0.26
CLN6-219ENST00000637329 CX3CR1P49238 355 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 RORCP51449 518 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 PER3P56645 1201 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 TGFBR3Q03167 851 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 RBPJQ06330 500 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 INSL4Q14641 139 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 HSD17B12Q53GQ0 312 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 RTL6Q6ICC9 239 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 CROCCP3Q8IVE0 287 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 ELMOD2Q8IZ81 293 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 C1orf162Q8NEQ5 155 aaPredicted RBP13.44□□□□□ -0.26
CLN6-219ENST00000637329 OR1K1Q8NGR3 316 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 AP3S1Q92572 193 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 SNRNP40Q96DI7 357 aaKnown RBP13.44□□□□□ -0.26
CLN6-219ENST00000637329 OR2H1Q9GZK4 316 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 SLC5A6Q9Y289 635 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 ZNF835Q9Y2P0 537 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 TRBV5-7A0A0A0MS05 114 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 IQCMA0A1B0GVH7 501 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 LOC107986453A0A1B0GWG9 222 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 ANKRD61A6NGH8 418 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 TTLL8A6PVC2 850 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 UBL3O95164 117 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 IL18BPO95998 194 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 TMIGD3P0DMS9 266 aaPredicted RBP13.43□□□□□ -0.26
CLN6-219ENST00000637329 COX5BP10606 129 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 EDN3P14138 238 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 COX5AP20674 150 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 KRTAP27-1Q3LI81 207 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 DRAM2Q6UX65 266 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 GFRALQ6UXV0 394 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 SKA3Q8IX90 412 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 CCDC36Q8IYA8 594 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 ZNF283Q8N7M2 679 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 CNEP1R1Q8N9A8 125 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 OR1F12Q8NHA8 337 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 MCFD2Q8NI22 146 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 TBC1D15Q8TC07 691 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 TSEN15Q8WW01 171 aaKnown RBP13.43□□□□□ -0.26
CLN6-219ENST00000637329 SFXN3Q9BWM7 321 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 PBOV1Q9GZY1 135 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 CXorf56Q9H5V9 222 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 SP140LQ9H930 580 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 PLSCR4Q9NRQ2 329 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 SNTG1Q9NSN8 517 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 HHLA2Q9UM44 414 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 PMF1-BGLAPU3KQ54 211 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 BOD1L1Q8NFC6 3051 aa13.43□□□□□ -0.26
CLN6-219ENST00000637329 M0R135 149 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 ZNHIT1O43257 154 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 TMEM127O75204 238 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 TNFSF13O75888 250 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 IL2RAP01589 272 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 TTRP02766 147 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 CD2P06729 351 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
CLN6-219ENST00000637329 ZNF12P17014 697 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 FSTP19883 344 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 ARR3P36575 388 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 TPTEP56180 551 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 ZNF121P58317 390 aaPredicted RBP13.42□□□□□ -0.26
CLN6-219ENST00000637329 PSG4Q00888 419 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 HNRNPA0Q13151 305 aaKnown RBP13.42□□□□□ -0.26
CLN6-219ENST00000637329 TMEM53Q6P2H8 277 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 SEM1Q6ZVN7 128 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 CCDC54Q8NEL0 328 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 TMEM106AQ96A25 262 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 ZNF799Q96GE5 643 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 SLITRK2Q9H156 845 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 WNT5BQ9H1J7 359 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 SLC17A5Q9NRA2 495 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 ZNF224Q9NZL3 707 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 CRNNQ9UBG3 495 aaPredicted RBP13.42□□□□□ -0.26
CLN6-219ENST00000637329 PROCRQ9UNN8 238 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 DHDHQ9UQ10 334 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 SLC22A13Q9Y226 551 aa13.42□□□□□ -0.26
CLN6-219ENST00000637329 ARHGAP21Q5T5U3 1957 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 A0A0U1RQV5 110 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 DVL2O14641 736 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 PDCD5O14737 125 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 SLC19A2O60779 497 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 CCL1P22362 96 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 CEACAM8P31997 349 aaPredicted RBP13.41□□□□□ -0.26
CLN6-219ENST00000637329 HTR5AP47898 357 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 PRKXP51817 358 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 MXD1Q05195 221 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 DYNC1I2Q13409 638 aaKnown RBP13.41□□□□□ -0.26
CLN6-219ENST00000637329 FAM27D1Q5T7N8 215 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 VWA1Q6PCB0 445 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 PRSS45Q7RTY3 260 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 C17orf78Q8N4C9 275 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 OR8B12Q8NGG6 310 aa13.41□□□□□ -0.26
CLN6-219ENST00000637329 OR52H1Q8NGJ2 320 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms