RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SURF4O15260 269 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 E2F6O75461 281 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 LCATP04180 440 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 ANPEPP15144 967 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 HOXB6P17509 224 aaKnown RBP11.71□□□□□ -0.53
PNKP-228ENST00000637325 TNFRSF1AP19438 455 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 FMO3P31513 532 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 GGT2P36268 569 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 SRP14P37108 136 aaKnown RBP11.71□□□□□ -0.53
PNKP-228ENST00000637325 FLOT2Q14254 428 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 HLXQ14774 488 aaPredicted RBP11.71□□□□□ -0.53
PNKP-228ENST00000637325 OR2T2Q6IF00 324 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 ATG16L2Q8NAA4 619 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 OR51L1Q8NGJ5 315 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 OR9Q1Q8NGQ5 310 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 OR4Q3Q8NH05 313 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 OR51F2Q8NH61 342 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 CANT1Q8WVQ1 401 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 RAB39BQ96DA2 213 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 ZNF582Q96NG8 517 aaPredicted RBP11.71□□□□□ -0.53
PNKP-228ENST00000637325 DDOQ99489 341 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 FEVQ99581 238 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 MDFIQ99750 246 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 HCAR1Q9BXC0 346 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 ZNF665Q9H7R5 613 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 YY1AP1Q9H869 796 aa11.71□□□□□ -0.53
PNKP-228ENST00000637325 MRPL22Q9NWU5 206 aaKnown RBP11.71□□□□□ -0.53
PNKP-228ENST00000637325 RIIAD1A6NNX1 92 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 DNAJC8O75937 253 aaPredicted RBP11.7□□□□□ -0.54
PNKP-228ENST00000637325 MSMBP08118 114 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 ACSM4P0C7M7 580 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 ZNF3P17036 446 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 TPTEP56180 551 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 LMO4P61968 165 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 MALLQ13021 153 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 CRMP1Q14194 572 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 TAF13Q15543 124 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 ACSM5Q6NUN0 579 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 SLC27A4Q6P1M0 643 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 FBXW12Q6X9E4 464 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 Q6ZR03 302 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 SPTSSAQ969W0 71 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 TMEM186Q96B77 213 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 OTULINQ96BN8 352 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 GAL3ST1Q99999 423 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 NIPSNAP1Q9BPW8 284 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 ZNF556Q9HAH1 456 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 HIF1ANQ9NWT6 349 aa11.7□□□□□ -0.54
PNKP-228ENST00000637325 PDP1Q9P0J1 537 aaPredicted RBP11.7□□□□□ -0.54
PNKP-228ENST00000637325 CUBNO60494 3623 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 SVEP1Q4LDE5 3571 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 RNF212BA8MTL3 300 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 GYPBP06028 91 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 SPARCP09486 303 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 SELEP16581 610 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 POU1F1P28069 291 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 RPS27P42677 84 aaKnown RBP11.69□□□□□ -0.54
PNKP-228ENST00000637325 SLC6A9P48067 706 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 ENTPD1P49961 510 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 ERFP50548 548 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 SLC25A1P53007 311 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 RSPO1Q2MKA7 263 aaPredicted RBP11.69□□□□□ -0.54
PNKP-228ENST00000637325 SPRNQ5BIV9 151 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 ZNF362Q5T0B9 420 aaPredicted RBP11.69□□□□□ -0.54
PNKP-228ENST00000637325 CD300LDQ6UXZ3 194 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 ZNF771Q7L3S4 317 aaPredicted RBP11.69□□□□□ -0.54
PNKP-228ENST00000637325 OR8G5Q8NG78 346 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 OR6K6Q8NGW6 343 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 OR13G1Q8NGZ3 307 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 ITLN1Q8WWA0 313 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 ZNRF4Q8WWF5 429 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 SLC7A6OSQ96CW6 309 aaPredicted RBP11.69□□□□□ -0.54
PNKP-228ENST00000637325 RBM4Q9BWF3 364 aaKnown RBP11.69□□□□□ -0.54
PNKP-228ENST00000637325 C1QTNF5Q9BXJ0 243 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 WDR76Q9H967 626 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 UBAP1Q9NZ09 502 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 IL19Q9UHD0 177 aa11.69□□□□□ -0.54
PNKP-228ENST00000637325 MXRA5Q9NR99 2828 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 TRAV20A0A0B4J274 112 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 ARRDC5A6NEK1 342 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 M0R135 149 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 ZNF593O00488 134 aaPredicted RBP11.68□□□□□ -0.54
PNKP-228ENST00000637325 FKBP6O75344 327 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 SBK2P0C263 348 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 SPI1P17947 270 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 GRK5P34947 590 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 BLVRAP53004 296 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 CBX1P83916 185 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 KRTAP27-1Q3LI81 207 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 LYPD4Q6UWN0 246 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 CXXC5Q7LFL8 322 aaKnown RBP11.68□□□□□ -0.54
PNKP-228ENST00000637325 DCXRQ7Z4W1 244 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 TMEM179BQ7Z7N9 219 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 NAA40Q86UY6 237 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 IQCF1Q8N6M8 205 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 ZNF283Q8N7M2 679 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 ZNF511Q8NB15 262 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 BHLHE23Q8NDY6 225 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 TMEM158Q8WZ71 300 aa11.68□□□□□ -0.54
PNKP-228ENST00000637325 ZNF799Q96GE5 643 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms