RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 RNF212Q495C1 297 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 MDGA2Q7Z553 956 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 TERB2Q8NHR7 220 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 TCEAL3Q969E4 200 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 SCGB3A2Q96PL1 93 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 RHBDD3Q9Y3P4 386 aa13.25□□□□□ -0.29
CACNA1A-220ENST00000635988 WIPF3A6NGB9 483 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 H0YIZ8 118 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 MBTPS2O43462 519 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 SGCEO43556 437 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 SMCO1Q147U7 214 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 ACTBL2Q562R1 376 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 FAM76BQ5HYJ3 339 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 TANGO2Q6ICL3 276 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 YAF2Q8IY57 180 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 MARCH1Q8TCQ1 289 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 FOXN4Q96NZ1 517 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 CNTD2Q9H8S5 307 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 CLDN16Q9Y5I7 305 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 MPDZO75970 2070 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 MFNGO00587 321 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 S100A6P06703 90 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 SFTA3P0C7M3 94 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 CCL5P13501 91 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 FCARP24071 287 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 RABIFP47224 123 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 HSD17B7P56937 341 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 HABP2Q14520 560 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 HMGN3Q15651 99 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 OTPQ5XKR4 325 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 DEGS2Q6QHC5 323 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 SLC22A24Q8N4F4 322 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 ARRDC1Q8N5I2 433 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 OR4K15Q8NH41 348 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 FBRSQ9HAH7 460 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 G6PC2Q9NQR9 355 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 ASH2LQ9UBL3 628 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 FBLN5Q9UBX5 448 aa13.24□□□□□ -0.29
CACNA1A-220ENST00000635988 LINC01387J3KSC0 135 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 SFT2D2O95562 160 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 FABP1P07148 127 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 ZNF806P0C7X5 589 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 CTLA4P16410 223 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 ABCD3P28288 659 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 SNRPEP62304 92 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 HTRA3P83110 453 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 SRSF5Q13243 272 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 PRTGQ2VWP7 1150 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 ARMC6Q6NXE6 501 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 FAM160A2Q8N612 972 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 NANPQ8TBE9 248 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 FAM60AQ9NP50 221 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 FAM96BQ9Y3D0 163 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 C5orf52A6NGY3 159 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 CEACAM18A8MTB9 384 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 H0Y8X5 98 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 K7EQS6 105 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 UBE2CO00762 179 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 HCRTR1O43613 425 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 OR2T1O43869 369 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 PLGP00747 810 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 IGHMP01871 453 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 CD5P06127 495 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 CHRM2P08172 466 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 ZNF823P16415 610 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 SMAD2Q15796 467 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 DEFB110Q30KQ9 67 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 TRIM43Q96BQ3 446 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 CMBLQ96DG6 245 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 CPNE2Q96FN4 548 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 CAPNS2Q96L46 248 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 BMFQ96LC9 184 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 FN3KRPQ9HA64 309 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 IL23AQ9NPF7 189 aa13.23□□□□□ -0.29
CACNA1A-220ENST00000635988 TMEM269A0A1B0GVZ9 245 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 PMP2P02689 132 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 CSTBP04080 98 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 CLPSP04118 112 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 GLAP06280 429 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 QRFPP83859 136 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 UNC119Q13432 240 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 ERV3-1Q14264 604 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 SLC22A6Q4U2R8 563 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 VAX1Q5SQQ9 334 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 ZNF561Q8N587 486 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 ZNF524Q96C55 264 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 SLC25A36Q96CQ1 311 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 NECAB3Q96P71 396 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 OR5B2Q96R09 309 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 SLC5A7Q9GZV3 580 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 PDE7BQ9NP56 450 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 GPR132Q9UNW8 380 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 KPTNQ9Y664 436 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 FANCMQ8IYD8 2048 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 FBXO24O75426 580 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 DXOO77932 396 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 ST6GAL1P15907 406 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 TNFRSF4P43489 277 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 SEC13P55735 322 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms