RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 M0R135 149 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 PHYHO14832 338 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 GPRIN2O60269 458 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 SMPD2O60906 423 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 WBP4O75554 376 aaKnown RBP12.68□□□□□ -0.38
PNKP-221ENST00000627317 LCKP06239 509 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 H2BFMP0C1H6 154 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 DANCRP0C864 163 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 CD99P14209 185 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 ALOX5APP20292 161 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 HSD11B1P28845 292 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 WNT5AP41221 380 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 RAD52P43351 418 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 SLC6A9P48067 706 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 RGS6P49758 472 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 FABP6P51161 128 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 TPTEP56180 551 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 ISL1P61371 349 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 GRB2P62993 217 aaKnown RBP12.68□□□□□ -0.38
PNKP-221ENST00000627317 NKX6-1P78426 367 aaPredicted RBP12.68□□□□□ -0.38
PNKP-221ENST00000627317 KCTD18Q6PI47 426 aaPredicted RBP12.68□□□□□ -0.38
PNKP-221ENST00000627317 RFPL4BQ6ZWI9 263 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 FBXL14Q8N1E6 418 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 OR10H4Q8NGA5 316 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 ABHD4Q8TB40 342 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 ZNF799Q96GE5 643 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 C4orf45Q96LM5 186 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 TBX5Q99593 518 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 ZNF184Q99676 751 aaPredicted RBP12.68□□□□□ -0.38
PNKP-221ENST00000627317 TTTY10Q9BZA0 68 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 BCL2L14Q9BZR8 327 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 ZNF442Q9H7R0 627 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 AMBNQ9NP70 447 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 RPL36Q9Y3U8 105 aaKnown RBP12.68□□□□□ -0.38
PNKP-221ENST00000627317 MED13LQ71F56 2210 aa12.68□□□□□ -0.38
PNKP-221ENST00000627317 NSD1Q96L73 2696 aaPredicted RBP12.67□□□□□ -0.38
PNKP-221ENST00000627317 SOD3P08294 240 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 OR2T7P0C7T2 308 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 THBS4P35443 961 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 OPRL1P41146 370 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 UCP2P55851 309 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 ACTC1P68032 377 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 ACTA1P68133 377 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 SMN1Q16637 294 aaKnown RBP12.67□□□□□ -0.38
PNKP-221ENST00000627317 Q5PR19 223 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 ZNF544Q6NX49 715 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 LRRN1Q6UXK5 716 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 KRT77Q7Z794 578 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.67□□□□□ -0.38
PNKP-221ENST00000627317 ZNF101Q8IZC7 436 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 ZNF283Q8N7M2 679 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 OR1J1Q8NGS3 322 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 OR2T27Q8NH04 317 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 LGALS12Q96DT0 336 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 KCNJ15Q99712 375 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 IKZF2Q9UKS7 526 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 COPS3Q9UNS2 423 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 CMAHPQ9Y471 501 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 PCDHGB1Q9Y5G3 927 aa12.67□□□□□ -0.38
PNKP-221ENST00000627317 OVOL3O00110 214 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 ICMTO60725 284 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 APOC1P02654 83 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 ACSM4P0C7M7 580 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 GLRXP35754 106 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 PTH2RP49190 550 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 PRKXP51817 358 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 CXCR4P61073 352 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 PPP1CBP62140 327 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 CDK5R2Q13319 367 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 KRTAP27-1Q3LI81 207 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 SPATA46Q5T0L3 261 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 SHEQ5VZ18 495 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 RGS7BPQ6MZT1 257 aaPredicted RBP12.66□□□□□ -0.38
PNKP-221ENST00000627317 ZNF322Q6U7Q0 402 aaPredicted RBP12.66□□□□□ -0.38
PNKP-221ENST00000627317 PRSS57Q6UWY2 283 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 DRAM2Q6UX65 266 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 RHOUQ7L0Q8 258 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 RFLNBQ8N5W9 214 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 TMEM171Q8WVE6 324 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 APOBEC3DQ96AK3 386 aaPredicted RBP12.66□□□□□ -0.38
PNKP-221ENST00000627317 ANKRD60Q9BZ19 345 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 Q9H521 79 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 NIPAL2Q9H841 368 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 TBCCD1Q9NVR7 557 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 RAB26Q9ULW5 256 aa12.66□□□□□ -0.38
PNKP-221ENST00000627317 A0A1W2PQL4 384 aaPredicted RBP12.65□□□□□ -0.38
PNKP-221ENST00000627317 IRGMA1A4Y4 181 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 J3QW42 95 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 PSMD9O00233 223 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 FADS2O95864 444 aaKnown RBP12.65□□□□□ -0.38
PNKP-221ENST00000627317 LCATP04180 440 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 OR4A8P0C604 315 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 FOSL1P15407 271 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 MYF6P23409 242 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 APOBEC3AP31941 199 aaPredicted RBP12.65□□□□□ -0.38
PNKP-221ENST00000627317 OTX1P32242 354 aaPredicted RBP12.65□□□□□ -0.38
PNKP-221ENST00000627317 TTKP33981 857 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 CX3CR1P49238 355 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 ERVS71-1P61550 626 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 RAB40BQ12829 278 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms