RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 DOK3Q7L591 496 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 ZDHHC23Q8IYP9 409 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 OR2AE1Q8NHA4 323 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 CASTOR1Q8WTX7 329 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 SCGB3A2Q96PL1 93 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 INPP5EQ9NRR6 644 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 GFOD1Q9NXC2 390 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 CD300AQ9UGN4 299 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 A4GNTQ9UNA3 340 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 PLXNA3P51805 1871 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 CCDC182A6NF36 153 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 DENRO43583 198 aaKnown RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 DNPH1O43598 174 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 TSC22D2O75157 780 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 RBBP9O75884 186 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF93P35789 620 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 VBP1P61758 197 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 GPR176Q14439 515 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 CDK10Q15131 360 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 ATG4DQ86TL0 474 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF573Q86YE8 665 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 OR56B2PQ8NGI1 322 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 OR51F2Q8NH61 342 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 OR6X1Q8NH79 312 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 GHSRQ92847 366 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 CMBLQ96DG6 245 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 PDCD1LG2Q9BQ51 273 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 CLEC4MQ9H2X3 399 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 MEPEQ9NQ76 525 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 ONECUT1Q9UBC0 465 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 MTCL1Q9Y4B5 1905 aaKnown RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 WDR81Q562E7 1941 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 ANKHD1Q8IWZ3 2542 aaKnown RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 IGKV3D-11A0A0A0MRZ8 115 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 LOC107986453A0A1B0GWG9 222 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 BET1O15155 118 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 UPK3AO75631 287 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 DHFRP00374 187 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 TDGF1P13385 188 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 GTF2F2P13984 249 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 HTR1FP30939 366 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ART1P52961 327 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 TLE4Q04727 773 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 FAHD2BQ6P2I3 314 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SERPINA12Q8IW75 414 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SLC22A24Q8N4F4 322 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 FAHD2AQ96GK7 314 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SIGLEC11Q96RL6 698 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 CMSS1Q9BQ75 279 aaKnown RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 METTL8Q9H825 291 aaKnown RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 FN3KRPQ9HA64 309 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 GPR35Q9HC97 309 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 GPR27Q9NS67 375 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 COPZ2Q9P299 210 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 EXTL2Q9UBQ6 330 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 STEAP1Q9UHE8 339 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ICAM5Q9UMF0 924 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 MEIKINA0A087WXM9 373 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 LOC102723996A0A087X1L8 192 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 C5orf51A6NDU8 294 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SIRPB1O00241 398 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ADAM20O43506 726 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 GPANK1O95872 356 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 IFNA21P01568 189 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 DDOSTP39656 456 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 LRRC10Q5BKY1 277 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 APOOLQ6UXV4 268 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SLC25A26Q70HW3 274 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 RDH10Q8IZV5 341 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 TOMM5Q8N4H5 51 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SPERTQ8NA61 448 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 TMEM59Q9BXS4 323 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SIGLEC7Q9Y286 467 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 MRPS28Q9Y2Q9 187 aaKnown RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SNRNP200O75643 2136 aaKnown RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ASPDHA6ND91 283 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 GPRIN2O60269 458 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 FADS1O60427 444 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 CTLA4P16410 223 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ALKBH1Q13686 389 aaKnown RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 PRR30Q53SZ7 412 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 MDP1Q86V88 176 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ELMOD2Q8IZ81 293 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 OIT3Q8WWZ8 545 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 UBE2FQ969M7 185 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 RRNAD1Q96FB5 475 aaKnown RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 CCL19Q99731 98 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SLC22A4Q9H015 551 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 MSL2Q9HCI7 577 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SCP2D1Q9UJQ7 156 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 CHCHD2Q9Y6H1 151 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 LY6G6EA0A0G2JKS1 128 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ATP6V1G2-DDX39BF2Z307 99 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 TGFBR3LH3BV60 316 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SCGB1D2O95969 90 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ALPLP05186 524 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 FAHP16930 419 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 HTR2AP28223 471 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 RNASE10Q5GAN6 216 aaKnown RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 VWA1Q6PCB0 445 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms