RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ELOBQ15370 118 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 IQCJQ1A5X6 159 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 C1orf53Q5VUE5 145 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 TMEM220Q6QAJ8 160 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 SLC35D2Q76EJ3 337 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 DCXRQ7Z4W1 244 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 MCEMP1Q8IX19 187 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 NRMQ8IXM6 262 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 AMER3Q8N944 861 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 OR9A4Q8NGU2 314 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 SOCS4Q8WXH5 440 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 SMPDL3AQ92484 453 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 HLA-CQ95604 372 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 NEURL3Q96EH8 262 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 ATP6V0BQ99437 205 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 GFI1Q99684 422 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 NKX3-1Q99801 234 aaPredicted RBP7.15□□□□□ -1.27
VPS11-209ENST00000622309 GSX1Q9H4S2 264 aaPredicted RBP7.15□□□□□ -1.27
VPS11-209ENST00000622309 IL17CQ9P0M4 197 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 HS3ST3B1Q9Y662 390 aa7.15□□□□□ -1.27
VPS11-209ENST00000622309 LOC102724200A0A096LPH7 203 aaPredicted RBP7.14□□□□□ -1.27
VPS11-209ENST00000622309 P2RX6O15547 441 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 HCRTR2O43614 444 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 ALOX12BO75342 701 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 NTN1O95631 604 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 MBPP02686 304 aaPredicted RBP7.14□□□□□ -1.27
VPS11-209ENST00000622309 PGA3P0DJD8 388 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 TNFSF4P23510 183 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 TSFMP43897 325 aaKnown RBP7.14□□□□□ -1.27
VPS11-209ENST00000622309 CEBPGP53567 150 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 PTTG1IPP53801 180 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 ADAM8P78325 824 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 NR0B2Q15466 257 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 CEBPEQ15744 281 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 ARTNQ5T4W7 220 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 STPG1Q5TH74 334 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 FBXL22Q6P050 247 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 RPL22L1Q6P5R6 122 aaKnown RBP7.14□□□□□ -1.27
VPS11-209ENST00000622309 TMPPEQ6ZT21 453 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 COMMD6Q7Z4G1 85 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 GKN2Q86XP6 184 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 KDM8Q8N371 416 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 C11orf42Q8N5U0 333 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 ACOT4Q8N9L9 421 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 CLEC1AQ8NC01 280 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 OR9K2Q8NGE7 335 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 SLC25A43Q8WUT9 341 aaPredicted RBP7.14□□□□□ -1.27
VPS11-209ENST00000622309 SMARCD2Q92925 531 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 STACQ99469 402 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 HCAR1Q9BXC0 346 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 CSNK1G1Q9HCP0 422 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 MSGN1A6NI15 193 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 TRDCB7Z8K6 153 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 GEMIN2O14893 280 aaKnown RBP7.14□□□□□ -1.27
VPS11-209ENST00000622309 PLRG1O43660 514 aaKnown RBP7.14□□□□□ -1.27
VPS11-209ENST00000622309 AMBPP02760 352 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 OR5AC1P0C628 307 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 GIMD1P0DJR0 217 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 TACR3P29371 465 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 HSPB3Q12988 150 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 PPP1R1AQ13522 171 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 UPP1Q16831 310 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 AMZ1Q400G9 498 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 BTNL3Q6UXE8 466 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 DNM1P46Q6ZS02 220 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 TMEM183AQ8IXX5 376 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 OR52N4Q8NGI2 321 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 ABHD5Q8WTS1 349 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 CACNG8Q8WXS5 425 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 RAB39BQ96DA2 213 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 INTS14Q96SY0 518 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 RNF126Q9BV68 326 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 METTL8Q9H825 291 aaKnown RBP7.14□□□□□ -1.27
VPS11-209ENST00000622309 ANKRD10Q9NXR5 420 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 COLEC10Q9Y6Z7 277 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 HMGN4O00479 90 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 TAAR5O14804 337 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 COCHO43405 550 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 CYB5AP00167 134 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 KLK1P06870 262 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 CD37P11049 281 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 PTNP21246 168 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 PSMB10P40306 273 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 ACTA2P62736 377 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 ACTG2P63267 376 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 IER5LQ5T953 404 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 OLIG3Q7RTU3 272 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 NUDT10Q8NFP7 164 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 PELI1Q96FA3 418 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 FAM210BQ96KR6 192 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 VPS25Q9BRG1 176 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 METTL7AQ9H8H3 244 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 OR52A1Q9UKL2 312 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 ATG4BQ9Y4P1 393 aa7.14□□□□□ -1.27
VPS11-209ENST00000622309 TRBV6-7A0A0A0MS04 114 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 DHRS7CA6NNS2 312 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 PIN1P1O15428 100 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 RAMP1O60894 148 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 TGFB1P01137 390 aa7.13□□□□□ -1.27
VPS11-209ENST00000622309 TK1P04183 234 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms