RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 UBE2J2Q8N2K1 259 aa18.83■□□□□ 0.61
SPAST-204ENST00000621856 OR51E1Q8TCB6 317 aa18.83■□□□□ 0.61
SPAST-204ENST00000621856 LGALS14Q8TCE9 139 aa18.83■□□□□ 0.61
SPAST-204ENST00000621856 PGAM5Q96HS1 289 aa18.83■□□□□ 0.61
SPAST-204ENST00000621856 FOXJ3Q9UPW0 622 aa18.83■□□□□ 0.61
SPAST-204ENST00000621856 LMX1BO60663 402 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 TMEM127O75204 238 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 PDGFAP04085 211 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 ZNF32P17041 273 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 PCBD1P61457 104 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 Q6ZS92 163 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 GDPD1Q8N9F7 314 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 SPTSSAQ969W0 71 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 SARAFQ96BY9 339 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 TAAR6Q96RI8 345 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 HDHD2Q9H0R4 259 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 CYSLTR2Q9NS75 346 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 SPATA2Q9UM82 520 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 SSUH2Q9Y2M2 353 aa18.83■□□□□ 0.6
SPAST-204ENST00000621856 SPTBN2O15020 2390 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 hCG_2014768A0A024R1R8 64 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 WISP2O76076 250 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 APOC1P02654 83 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 FSTP19883 344 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 PTBP1P26599 531 aaKnown RBP eCLIP18.82■□□□□ 0.67e-8■■■□□ 17.8
SPAST-204ENST00000621856 AGTR1P30556 359 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 ARF1P84077 181 aaKnown RBP18.82■□□□□ 0.6
SPAST-204ENST00000621856 STK11Q15831 433 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 C9orf135Q5VTT2 229 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 DCDC5Q6ZRR9 648 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 SKA3Q8IX90 412 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 OR4M1Q8NGD0 313 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 FGGYQ96C11 551 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 SOSTQ9BQB4 213 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 C12orf49Q9H741 205 aa18.82■□□□□ 0.6
SPAST-204ENST00000621856 ZNF275Q9NSD4 429 aaPredicted RBP18.82■□□□□ 0.6
SPAST-204ENST00000621856 RPL36A-HNRNPH2H7BZ11 118 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 PATE4P0C8F1 98 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 EIF2S3P41091 472 aaKnown RBP18.81■□□□□ 0.6
SPAST-204ENST00000621856 CLDN12P56749 244 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 ASPHD2Q6ICH7 369 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 ZNF774Q6NX45 483 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 Q6ZNX1 250 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 ABHD12BQ7Z5M8 362 aaPredicted RBP18.81■□□□□ 0.6
SPAST-204ENST00000621856 SIAH3Q8IW03 269 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 POC5Q8NA72 575 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 SLC7A6Q92536 515 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 TRIB1Q96RU8 372 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 LIN7BQ9HAP6 207 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 GP6Q9HCN6 339 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 TIMM10BQ9Y5J6 103 aa18.81■□□□□ 0.6
SPAST-204ENST00000621856 K7EM74 188 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 M0R135 149 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 ZNHIT1O43257 154 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 APOA1P02647 267 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 IGFBP3P17936 291 aaPredicted RBP18.8■□□□□ 0.6
SPAST-204ENST00000621856 DEFA1P59665 94 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 DEFA3P59666 94 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 ECH1Q13011 328 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 P2RY14Q15391 338 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 BAK1Q16611 211 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 GFOD2Q3B7J2 385 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 NRN1LQ496H8 165 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 RBMXL3Q8N7X1 1067 aaKnown RBP18.8■□□□□ 0.6
SPAST-204ENST00000621856 DTX3Q8N9I9 347 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 OR5M9Q8NGP3 310 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 OR1F12Q8NHA8 337 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 AKR7LQ8NHP1 331 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 ZNF799Q96GE5 643 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 MRI1Q9BV20 369 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 PPP1R3EQ9H7J1 279 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 GPR84Q9NQS5 396 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 URB1O60287 2271 aaKnown RBP18.8■□□□□ 0.6
SPAST-204ENST00000621856 ARHGAP21Q5T5U3 1957 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 A0A1B0GTI1 187 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 RRP8O43159 456 aaKnown RBP18.8■□□□□ 0.6
SPAST-204ENST00000621856 SYNGR3O43761 229 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 DBHP09172 617 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 OCMP0CE72 109 aaPredicted RBP18.8■□□□□ 0.6
SPAST-204ENST00000621856 CALCBP10092 127 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 GNALP38405 381 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 FAPQ12884 760 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 UBE2NLQ5JXB2 153 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 NAA40Q86UY6 237 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 MINDY2Q8NBR6 621 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 FAM71F1Q96KD3 344 aaPredicted RBP18.8■□□□□ 0.6
SPAST-204ENST00000621856 OR2H1Q9GZK4 316 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 PLSCR2Q9NRY7 297 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 ZNF319Q9P2F9 582 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 CLCF1Q9UBD9 225 aa18.8■□□□□ 0.6
SPAST-204ENST00000621856 A6NIN4 97 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 IL7P13232 177 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 ZNF20P17024 532 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 OTX1P32242 354 aaPredicted RBP18.79■□□□□ 0.6
SPAST-204ENST00000621856 HTR5AP47898 357 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 TPTEP56180 551 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 PSG4Q00888 419 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 RSPO1Q2MKA7 263 aaPredicted RBP18.79■□□□□ 0.6
SPAST-204ENST00000621856 GLT8D1Q68CQ7 371 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 PRSS45Q7RTY3 260 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms