RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 RAB5BP61020 215 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 IL10RAQ13651 578 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 FAM189A2Q15884 450 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 MEP1BQ16820 701 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 MOGAT2Q3SYC2 334 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 RAET1LQ5VY80 246 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF529Q6P280 563 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 TMEM184AQ6ZMB5 413 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 KDM8Q8N371 416 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 OR51A2Q8NGJ7 313 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 NAT6Q93015 286 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF285Q96NJ3 590 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 PITHD1Q9GZP4 211 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-216ENST00000620854 RARRES3Q9UL19 164 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 EML5Q05BV3 1969 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 SDK2Q58EX2 2172 aa6.27□□□□□ -1.4
NEDD9-216ENST00000620854 PLXNA2O75051 1894 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 TRBV23-1A0A0A0MS06 115 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 VSTM2BA6NLU5 285 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 PRSS44E7EML9 344 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 AQP8O94778 261 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 CEACAM5P06731 702 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 UBBP0CG47 229 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 UBCP0CG48 685 aaKnown RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 PET100P0DJ07 73 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 CALCBP10092 127 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 ADCYAP1P18509 176 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 CSF2RBP32927 897 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 OR1D4P47884 311 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 CAMLGP49069 296 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 CTAG1AP78358 180 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 GNMTQ14749 295 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 SLC9A3R2Q15599 337 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 GPR157Q5UAW9 335 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 C11orf87Q6NUJ2 197 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 TMPPEQ6ZT21 453 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 RAB11FIP2Q7L804 512 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 SYT13Q7L8C5 426 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 PM20D2Q8IYS1 436 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 RCBTB1Q8NDN9 531 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 RHBDD1Q8TEB9 315 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF775Q96BV0 537 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF764Q96H86 408 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 RBM24Q9BX46 236 aaKnown RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 GAREM1Q9H706 876 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 MED9Q9NWA0 146 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 C19orf25Q9UFG5 118 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 FANCMQ8IYD8 2048 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 NPIPA2E9PIF3 369 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 NPIPA3F8WFD2 350 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 HCRTR1O43613 425 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 UPK3AO75631 287 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 GLCEO94923 617 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 CER1O95813 267 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 TSPAN15O95858 294 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 MEOX2P50222 304 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 CCR5P51681 352 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 RPS27AP62979 156 aaKnown RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 UBA52P62987 128 aaKnown RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 HSD11B2P80365 405 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 MRPS10P82664 201 aaKnown RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 PSG6Q00889 435 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 TFF2Q03403 129 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 GPR18Q14330 331 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 ATPAF1Q5TC12 328 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 ANKRD16Q6P6B7 361 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 CBLN3Q6UW01 205 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 ABHD12BQ7Z5M8 362 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF611Q8N823 705 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 OR5D18Q8NGL1 313 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 ARL11Q969Q4 196 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 SPACA5Q96QH8 159 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 KLHDC3Q9BQ90 382 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 NIT2Q9NQR4 276 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 DNAJB12Q9NXW2 375 aaKnown RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 DHCR7Q9UBM7 475 aaKnown RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 WNT16Q9UBV4 365 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 CTSFQ9UBX1 484 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF629Q9UEG4 869 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 A0A0D9SG52 128 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 TMEM269A0A1B0GVZ9 245 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 EPOPA6NHQ4 379 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 METTL12A8MUP2 240 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 TXNL1O43396 289 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 RAD51DO75771 328 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 WNT11O96014 354 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 RAB6AP20340 208 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 FBLP22087 321 aaKnown RBP6.27□□□□□ -1.41
NEDD9-216ENST00000620854 PPP1CAP62136 330 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 ACY1Q03154 408 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 GLO1Q04760 184 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 PPP1R1AQ13522 171 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 WDR38Q5JTN6 314 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 LINC01590Q5TEZ4 76 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 C1QL3Q5VWW1 255 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 EID2Q8N6I1 236 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 CLEC1AQ8NC01 280 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 RXFP4Q8TDU9 374 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 NUDCD2Q8WVJ2 157 aa6.27□□□□□ -1.41
NEDD9-216ENST00000620854 MR1Q95460 341 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms