RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 OR10AD1Q8NGE0 317 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 OR52L1Q8NGH7 329 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 OR5L1Q8NGL2 311 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 OR2V2Q96R30 315 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 PITX2Q99697 317 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 CDADC1Q9BWV3 514 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 TMPRSS13Q9BYE2 586 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 OCEL1Q9H607 264 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 PNRC2Q9NPJ4 139 aaKnown RBP14.48□□□□□ -0.09
HMGN3-203ENST00000620514 CYB5R1Q9UHQ9 305 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 ARHGAP32A7KAX9 2087 aa14.48□□□□□ -0.09
HMGN3-203ENST00000620514 TVP23AA6NH52 213 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 F5H5K5 113 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 FAM107AO95990 144 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 ACSM4P0C7M7 580 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 PSKH1P11801 424 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 TNFRSF1AP19438 455 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 RPS27P42677 84 aaKnown RBP14.47□□□□□ -0.09
HMGN3-203ENST00000620514 LCN2P80188 198 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 TRIM25Q14258 630 aaKnown RBP14.47□□□□□ -0.09
HMGN3-203ENST00000620514 RASSF6Q6ZTQ3 369 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 ARHGAP24Q8N264 748 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 AQP11Q8NBQ7 271 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 CCDC197Q8NCU1 140 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 BHLHE23Q8NDY6 225 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 OR8G5Q8NG78 346 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 OR51L1Q8NGJ5 315 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 OR2AJ1Q8NGZ0 328 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 MAP6Q96JE9 813 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 CLPTM1LQ96KA5 538 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 SIGLEC11Q96RL6 698 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 C1QTNF5Q9BXJ0 243 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 MUC13Q9H3R2 512 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 MAGIXQ9H6Y5 334 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 IL20Q9NYY1 176 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 IL19Q9UHD0 177 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 U3KQV3 271 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 FBN3Q75N90 2809 aa14.47□□□□□ -0.09
HMGN3-203ENST00000620514 A0A0G2JMP0 313 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 IGHV3-64DA0A0J9YX35 117 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 A0A0X1KG70 313 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 RGS9O75916 674 aaPredicted RBP14.46□□□□□ -0.09
HMGN3-203ENST00000620514 CALB2P22676 271 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 ZFP36P26651 326 aaKnown RBP14.46□□□□□ -0.09
HMGN3-203ENST00000620514 TRAP1Q12931 704 aaKnown RBP14.46□□□□□ -0.09
HMGN3-203ENST00000620514 ZMYND11Q15326 602 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 DCAF12L2Q5VW00 463 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 OR2T5Q6IEZ7 315 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 RPL13AP3Q6NVV1 102 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 LINC00471Q8N535 108 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 SLC37A3Q8NCC5 494 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 PROKR2Q8NFJ6 384 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 OR4M2Q8NGB6 313 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 OR10S1Q8NGN2 331 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 OR9Q1Q8NGQ5 310 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 OR2T29Q8NH02 315 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 OR4Q3Q8NH05 313 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 MEGF10Q96KG7 1140 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 ATF6BQ99941 703 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 TSSK6Q9BXA6 273 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 TBC1D23Q9NUY8 699 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 PPP1R3CQ9UQK1 317 aa14.46□□□□□ -0.09
HMGN3-203ENST00000620514 SURF4O15260 269 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 MLNRO43193 412 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 VENTXO95231 258 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 SOX14O95416 240 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 ZNF823P16415 610 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 ADRA2CP18825 462 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 ANOS1P23352 680 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 MMP16P51512 607 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 ECH1Q13011 328 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 OR13G1Q8NGZ3 307 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 OR2T4Q8NH00 348 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 ZNF420Q8TAQ5 688 aaPredicted RBP14.45□□□□□ -0.1
HMGN3-203ENST00000620514 ST7LQ8TDW4 575 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 CCDC124Q96CT7 223 aaKnown RBP14.45□□□□□ -0.1
HMGN3-203ENST00000620514 ZNF582Q96NG8 517 aaPredicted RBP14.45□□□□□ -0.1
HMGN3-203ENST00000620514 SLC30A2Q9BRI3 323 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 GCM1Q9NP62 436 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 ARMC1Q9NVT9 282 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 PCDHB10Q9UN67 800 aa14.45□□□□□ -0.1
HMGN3-203ENST00000620514 SAMHD1Q9Y3Z3 626 aaKnown RBP14.45□□□□□ -0.1
HMGN3-203ENST00000620514 WNK2Q9Y3S1 2297 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 IQCF6A8MYZ5 107 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 F5H5P2 479 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 TMEM178BH3BS89 294 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 HAX1O00165 279 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 LCATP04180 440 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 GYPBP06028 91 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 SEC61A1P61619 476 aaKnown RBP14.44□□□□□ -0.1
HMGN3-203ENST00000620514 BTG1P62324 171 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 CRMP1Q14194 572 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 GK2Q14410 553 aaPredicted RBP14.44□□□□□ -0.1
HMGN3-203ENST00000620514 MICAQ29983 383 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 TMEM155Q4W5P6 130 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 FAM98BQ52LJ0 330 aaKnown RBP14.44□□□□□ -0.1
HMGN3-203ENST00000620514 LRRC28Q86X40 367 aaPredicted RBP14.44□□□□□ -0.1
HMGN3-203ENST00000620514 LNX2Q8N448 690 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 HCAR1Q9BXC0 346 aa14.44□□□□□ -0.1
HMGN3-203ENST00000620514 DGCR6LQ9BY27 220 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms