RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RGS6P49758 472 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 CCR9P51686 369 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 PRKXP51817 358 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 TPTEP56180 551 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 GALK2Q01415 458 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 ALKBH1Q13686 389 aaKnown RBP6.98□□□□□ -1.29
CPNE3-209ENST00000620393 RAB39AQ14964 217 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 TSTQ16762 297 aaKnown RBP6.98□□□□□ -1.29
CPNE3-209ENST00000620393 DMKNQ6E0U4 476 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-209ENST00000620393 SSX8Q7RTT4 187 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 GPR141Q7Z602 305 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 PHC2Q8IXK0 858 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 OR13F1Q8NGS4 319 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 OR2G2Q8NGZ5 317 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 CA5BP1Q8WTZ4 195 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 SLC7A6Q92536 515 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 RNASE6Q93091 150 aaKnown RBP6.98□□□□□ -1.29
CPNE3-209ENST00000620393 SPTSSAQ969W0 71 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 S100PBPQ96BU1 408 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 MUCL1Q96DR8 90 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 LRRC46Q96FV0 321 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 OPALINQ96PE5 141 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 ACTR6Q9GZN1 396 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 MOV10Q9HCE1 1003 aaKnown RBP6.98□□□□□ -1.29
CPNE3-209ENST00000620393 CRNNQ9UBG3 495 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-209ENST00000620393 ATPIF1Q9UII2 106 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 ST6GALNAC2Q9UJ37 374 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 FBXL3Q9UKT7 428 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 GRIP1Q9Y3R0 1128 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 R4GMQ9 66 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 IGSF10Q6WRI0 2623 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 NBASA2RRP1 2371 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 DOCK7Q96N67 2140 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 PHF3Q92576 2039 aaKnown RBP6.98□□□□□ -1.29
CPNE3-209ENST00000620393 LOC100509620A0A075B734 347 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 TRBV2A0A0J9YWF9 115 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 A0A1W2PR80 420 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 OR4C45A6NMZ5 311 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 FAM90A27PA6NNH2 459 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 LOC110117498-PIK3R3F6TDL0 507 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 CCRL2O00421 344 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 AGFG2O95081 481 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 IGKV3-15P01624 115 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 IGLV1-44P01699 117 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 DBHP09172 617 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ACSM4P0C7M7 580 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 PPP3CBP16298 524 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF14P17017 642 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-209ENST00000620393 STOMP27105 288 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 APEX1P27695 318 aaKnown RBP6.97□□□□□ -1.29
CPNE3-209ENST00000620393 HTR5AP47898 357 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 GDI2P50395 445 aaKnown RBP6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF121P58317 390 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-209ENST00000620393 NANOS3P60323 173 aaKnown RBP6.97□□□□□ -1.29
CPNE3-209ENST00000620393 CDK5R1Q15078 307 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 PPA1Q15181 289 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 CDSNQ15517 529 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 TAB1Q15750 504 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 SSX1Q16384 188 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF829Q3KNS6 432 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-209ENST00000620393 C3orf36Q3SXR2 165 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 FREM1Q5H8C1 2179 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 LIPKQ5VXJ0 399 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF544Q6NX49 715 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 DRAM2Q6UX65 266 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 C22orf34Q6ZV56 151 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 PRSS45Q7RTY3 260 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 NAA40Q86UY6 237 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 SATL1Q86VE3 508 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 CATSPERDQ86XM0 798 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF584Q8IVC4 421 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 PRSS35Q8N3Z0 413 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF808Q8N4W9 903 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF283Q8N7M2 679 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ZFP41Q8N8Y5 198 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 IL17RDQ8NFM7 739 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 OR1J2Q8NGS2 313 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 RPS4Y2Q8TD47 263 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ITLN2Q8WWU7 325 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-209ENST00000620393 GHSRQ92847 366 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 UFD1Q92890 307 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 PPP1R14AQ96A00 147 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 YIPF6Q96EC8 236 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 POM121L2Q96KW2 1035 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 C4orf45Q96LM5 186 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 DCLRE1CQ96SD1 692 aaKnown RBP6.97□□□□□ -1.29
CPNE3-209ENST00000620393 C1QTNF6Q9BXI9 259 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 SP140LQ9H930 580 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 G6PC2Q9NQR9 355 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 BATF3Q9NR55 127 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 FAM206AQ9NX38 181 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 FRRS1LQ9P0K9 344 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 OR52A1Q9UKL2 312 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 SF3B6Q9Y3B4 125 aaKnown RBP6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ESPL1Q14674 2120 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 MYO7BQ6PIF6 2116 aa6.97□□□□□ -1.29
CPNE3-209ENST00000620393 ZFYVE26Q68DK2 2539 aa6.96□□□□□ -1.29
CPNE3-209ENST00000620393 DPPA5A6NC42 116 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 NKX2-6A6NCS4 301 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 FAM181BA6NEQ2 426 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms