RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 MSL2Q9HCI7 577 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 PNRC2Q9NPJ4 139 aaKnown RBP13.61□□□□□ -0.23
BRCA1-228ENST00000618469 CYSLTR2Q9NS75 346 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 ZNF275Q9NSD4 429 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-228ENST00000618469 DECR2Q9NUI1 292 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 NKIRAS2Q9NYR9 191 aa13.61□□□□□ -0.23
BRCA1-228ENST00000618469 PURGQ9UJV8 347 aaKnown RBP13.61□□□□□ -0.23
BRCA1-228ENST00000618469 WIPF1O43516 503 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 RP2O75695 350 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 PAICSP22234 425 aaKnown RBP13.6□□□□□ -0.23
BRCA1-228ENST00000618469 TUBG1P23258 451 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 GZMKP49863 264 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 ENTPD1P49961 510 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 CHN2P52757 468 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 MRPS11P82912 194 aaKnown RBP13.6□□□□□ -0.23
BRCA1-228ENST00000618469 ECH1Q13011 328 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 GINS1Q14691 196 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 FAM209AQ5JX71 171 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 USP51Q70EK9 711 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 ZNF511Q8NB15 262 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 UTP4Q969X6 686 aaKnown RBP13.6□□□□□ -0.23
BRCA1-228ENST00000618469 CMBLQ96DG6 245 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 NARFLQ9H6Q4 476 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 TUBG2Q9NRH3 451 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 TANC2Q9HCD6 1990 aa13.6□□□□□ -0.23
BRCA1-228ENST00000618469 IGHV1-69-2A0A0G2JMI3 117 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 F5H5K5 113 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 PPIHO43447 177 aaKnown RBP13.59□□□□□ -0.23
BRCA1-228ENST00000618469 LILRA1O75019 489 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 TACSTD2P09758 323 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 ACSM4P0C7M7 580 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 FAM157CP0CG43 387 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 KITLGP21583 273 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 IL2RGP31785 369 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 LIPAP38571 399 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 HLXQ14774 488 aaPredicted RBP13.59□□□□□ -0.23
BRCA1-228ENST00000618469 ATP6AP1Q15904 470 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 KRTAP27-1Q3LI81 207 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 CYB5R2Q6BCY4 276 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 ACSM5Q6NUN0 579 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 CCDC121Q6ZUS5 278 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 DCXRQ7Z4W1 244 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 OR5L1Q8NGL2 311 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 OR10S1Q8NGN2 331 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 OR5K1Q8NHB7 308 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 DNAJC9Q8WXX5 260 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 NRBF2Q96F24 287 aa13.59□□□□□ -0.23
BRCA1-228ENST00000618469 PAPOLBQ9NRJ5 636 aaKnown RBP13.59□□□□□ -0.23
BRCA1-228ENST00000618469 M0R135 149 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 SURF4O15260 269 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 FASP25445 335 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 SLC6A9P48067 706 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 BLVRAP53004 296 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 LINC01590Q5TEZ4 76 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 PLBD1Q6P4A8 553 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 FAHD1Q6P587 224 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 ASRGL1Q7L266 308 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 ERI1Q8IV48 349 aaKnown RBP13.58□□□□□ -0.24
BRCA1-228ENST00000618469 OR5AS1Q8N127 324 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 OR6N2Q8NGY6 317 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 SPTSSAQ969W0 71 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 ELMOD3Q96FG2 381 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 ZNF799Q96GE5 643 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 PLEKHA8Q96JA3 519 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 COPS4Q9BT78 406 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 SOX7Q9BT81 388 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 BEX2Q9BXY8 128 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 EGLN1Q9GZT9 426 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 OR51V1Q9H2C8 321 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 DDX28Q9NUL7 540 aaKnown RBP13.58□□□□□ -0.24
BRCA1-228ENST00000618469 ZDHHC8Q9ULC8 765 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 AP4S1Q9Y587 144 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 CACNG2Q9Y698 323 aa13.58□□□□□ -0.24
BRCA1-228ENST00000618469 LOC100289279A0A1B0GTE1 492 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 PRR23D1E9PI22 279 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-228ENST00000618469 ZNF593O00488 134 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-228ENST00000618469 LCATP04180 440 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 HMGN1P05114 100 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 ADH4P08319 380 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 PRR23D2P0DMB1 279 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-228ENST00000618469 FCGR1AP12314 374 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 RAC2P15153 192 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 GSTT1P30711 240 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 CRYBB2P43320 205 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 TPTEP56180 551 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 PRSS12P56730 875 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 TNFAIP6P98066 277 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-228ENST00000618469 CDK5Q00535 292 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 RSPO1Q2MKA7 263 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-228ENST00000618469 AVPI1Q5T686 147 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 TMEM236Q5W0B7 351 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 OR2T2Q6IF00 324 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 FBXW12Q6X9E4 464 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 Q6ZR03 302 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 IL17RELQ6ZVW7 336 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 SPATC1Q76KD6 591 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 OR2Z1Q8NG97 314 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 PTP4A1Q93096 173 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 HAVCR1Q96D42 359 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 MSI2Q96DH6 328 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms