RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 BTG1P62324 171 aa11□□□□□ -0.65
CIITA-212ENST00000618207 GSG1Q2KHT4 349 aa11□□□□□ -0.65
CIITA-212ENST00000618207 PHYHD1Q5SRE7 291 aa11□□□□□ -0.65
CIITA-212ENST00000618207 ABHD12BQ7Z5M8 362 aaPredicted RBP11□□□□□ -0.65
CIITA-212ENST00000618207 PPP1R32Q7Z5V6 425 aa11□□□□□ -0.65
CIITA-212ENST00000618207 ASCC1Q8N9N2 400 aaKnown RBP11□□□□□ -0.65
CIITA-212ENST00000618207 ACBD4Q8NC06 268 aa11□□□□□ -0.65
CIITA-212ENST00000618207 OR4D6Q8NGJ1 314 aa11□□□□□ -0.65
CIITA-212ENST00000618207 SCMH1Q96GD3 660 aa11□□□□□ -0.65
CIITA-212ENST00000618207 ETV7Q9Y603 341 aa11□□□□□ -0.65
CIITA-212ENST00000618207 A0A1W2PNV4 684 aa11□□□□□ -0.65
CIITA-212ENST00000618207 C5orf63A6NC05 138 aa11□□□□□ -0.65
CIITA-212ENST00000618207 HSPB2A8KAH6 182 aa11□□□□□ -0.65
CIITA-212ENST00000618207 F5H5K5 113 aa11□□□□□ -0.65
CIITA-212ENST00000618207 TRIM77I1YAP6 450 aa11□□□□□ -0.65
CIITA-212ENST00000618207 ETV2O00321 342 aaPredicted RBP11□□□□□ -0.65
CIITA-212ENST00000618207 CTDSPLO15194 276 aa11□□□□□ -0.65
CIITA-212ENST00000618207 XRCC3O43542 346 aa11□□□□□ -0.65
CIITA-212ENST00000618207 AQP8O94778 261 aa11□□□□□ -0.65
CIITA-212ENST00000618207 SP9P0CG40 484 aa11□□□□□ -0.65
CIITA-212ENST00000618207 PSMB1P20618 241 aaKnown RBP11□□□□□ -0.65
CIITA-212ENST00000618207 MLF1P58340 268 aa11□□□□□ -0.65
CIITA-212ENST00000618207 HSPB2Q16082 182 aa11□□□□□ -0.65
CIITA-212ENST00000618207 MOGAT2Q3SYC2 334 aa11□□□□□ -0.65
CIITA-212ENST00000618207 TIGD3Q6B0B8 471 aa11□□□□□ -0.65
CIITA-212ENST00000618207 BTN2A1Q7KYR7 527 aa11□□□□□ -0.65
CIITA-212ENST00000618207 OR52N4Q8NGI2 321 aa11□□□□□ -0.65
CIITA-212ENST00000618207 OR14L1PQ8NHC6 308 aa11□□□□□ -0.65
CIITA-212ENST00000618207 GRPEL2Q8TAA5 225 aa11□□□□□ -0.65
CIITA-212ENST00000618207 M1APQ8TC57 530 aa11□□□□□ -0.65
CIITA-212ENST00000618207 ZNF837Q96EG3 531 aaPredicted RBP11□□□□□ -0.65
CIITA-212ENST00000618207 FAM206AQ9NX38 181 aa11□□□□□ -0.65
CIITA-212ENST00000618207 ZNF319Q9P2F9 582 aa11□□□□□ -0.65
CIITA-212ENST00000618207 SLC5A6Q9Y289 635 aa11□□□□□ -0.65
CIITA-212ENST00000618207 A0A0J9YW62 118 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 LOC100289279A0A1B0GTE1 492 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 AQP7P3A6NL99 342 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 NPIPA2E9PIF3 369 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 NPIPA3F8WFD2 350 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 GTF2F2P13984 249 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 RAD52P43351 418 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 SLC6A9P48067 706 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 SELENOPP49908 381 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 PRSS12P56730 875 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 GABREP78334 506 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 SLC35A1P78382 337 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 DYRK1AQ13627 763 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 ANGPT1Q15389 498 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 ANKRD16Q6P6B7 361 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 NHLRC1Q6VVB1 395 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 ZNF704Q6ZNC4 412 aaPredicted RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 Q6ZTK2 550 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 FAM57BQ71RH2 274 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 ZNF283Q8N7M2 679 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 PAQR8Q8TEZ7 354 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 NPRL2Q8WTW4 380 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 CMBLQ96DG6 245 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 ANGPTL4Q9BY76 406 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 NOX3Q9HBY0 568 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 HDGFL3Q9Y3E1 203 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 FAM172BPA6NC97 362 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 P04436 131 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 RLN1P04808 185 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 CSRP1P21291 193 aaKnown RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 ACP1P24666 158 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 MNDAP41218 407 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 GZMKP49863 264 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 MAP2K6P52564 334 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 ZNF121P58317 390 aaPredicted RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 TMEM244Q5VVB8 128 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 HACD4Q5VWC8 232 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 SPINK14Q6IE38 97 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 C6orf15Q6UXA7 325 aaPredicted RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 TCTE3Q8IZS6 198 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 GTPBP8Q8N3Z3 284 aaPredicted RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 OR52B4Q8NGK2 314 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 OR1J2Q8NGS2 313 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 OR56B4Q8NH76 319 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 SLC25A43Q8WUT9 341 aaPredicted RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 ZBTB8AQ96BR9 441 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 INTS12Q96CB8 462 aaKnown RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 CMTM3Q96MX0 182 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 ZNF416Q9BWM5 594 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 IFT22Q9H7X7 185 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 P4HTMQ9NXG6 502 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 FOXJ2Q9P0K8 574 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 RIF1Q5UIP0 2472 aaKnown RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 ARID1AO14497 2285 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 ANKRD20A5PA0PJZ0 165 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 GUCA1AP43080 201 aaPredicted RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 DSCR4P56555 118 aaPredicted RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 AP3S2P59780 193 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 UBE2MP61081 183 aaKnown RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 PCK2Q16822 640 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 WIPI1Q5MNZ9 446 aaPredicted RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 DHRS13Q6UX07 377 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 ZNF782Q6ZMW2 699 aaPredicted RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 OR10Z1Q8NGY1 313 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 OR6X1Q8NH79 312 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 ROBO4Q8WZ75 1007 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms