RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 NDUFB11Q9NX14 153 aa6.51□□□□□ -1.37
VPS45-213ENST00000618148 ERRFI1Q9UJM3 462 aaPredicted RBP6.51□□□□□ -1.37
VPS45-213ENST00000618148 GNG8Q9UK08 70 aa6.51□□□□□ -1.37
VPS45-213ENST00000618148 FBXL3Q9UKT7 428 aa6.51□□□□□ -1.37
VPS45-213ENST00000618148 SLC5A6Q9Y289 635 aa6.51□□□□□ -1.37
VPS45-213ENST00000618148 AMDHD2Q9Y303 409 aa6.51□□□□□ -1.37
VPS45-213ENST00000618148 SLC25A15Q9Y619 301 aa6.51□□□□□ -1.37
VPS45-213ENST00000618148 SIRT4Q9Y6E7 314 aaPredicted RBP6.51□□□□□ -1.37
VPS45-213ENST00000618148 ANKHD1Q8IWZ3 2542 aaKnown RBP6.51□□□□□ -1.37
VPS45-213ENST00000618148 USP9XQ93008 2570 aaPredicted RBP6.51□□□□□ -1.37
VPS45-213ENST00000618148 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 CIB4A0PJX0 185 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 OR4C45A6NMZ5 311 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 C16orf97H3BN30 126 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 DOK2O60496 412 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 PNPP00491 289 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 SERPINA5P05154 406 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 H2BFMP0C1H6 154 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 PATE4P0C8F1 98 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 CBR1P16152 277 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 IL32P24001 234 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 PSMB9P28065 219 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 LIPAP38571 399 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 RGS6P49758 472 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 GBX2P52951 348 aaPredicted RBP6.5□□□□□ -1.37
VPS45-213ENST00000618148 NANOS3P60323 173 aaKnown RBP6.5□□□□□ -1.37
VPS45-213ENST00000618148 RAB1AP62820 205 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 SORDQ00796 357 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 TFF3Q07654 80 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 GSG1Q2KHT4 349 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 ZNF829Q3KNS6 432 aaPredicted RBP6.5□□□□□ -1.37
VPS45-213ENST00000618148 ARMCX4Q5H9R4 360 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 PABPC1L2AQ5JQF8 200 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 TMEM53Q6P2H8 277 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 CD200R1LQ6Q8B3 271 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 COLCA1Q6ZS62 124 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 KRT77Q7Z794 578 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 MDP1Q86V88 176 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 KLBQ86Z14 1044 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 ALDH16A1Q8IZ83 802 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 Q8N3U1 123 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 ZNF808Q8N4W9 903 aaPredicted RBP6.5□□□□□ -1.37
VPS45-213ENST00000618148 YIPF7Q8N8F6 280 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 CPEB3Q8NE35 698 aaKnown RBP6.5□□□□□ -1.37
VPS45-213ENST00000618148 OR2G2Q8NGZ5 317 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 HSD17B8Q92506 261 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 SMIM19Q96E16 107 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 YIPF6Q96EC8 236 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 POM121L2Q96KW2 1035 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 PGLYRP3Q96LB9 341 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 C4orf45Q96LM5 186 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 KCNJ15Q99712 375 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 RBM38Q9H0Z9 239 aaKnown RBP6.5□□□□□ -1.37
VPS45-213ENST00000618148 MOB1AQ9H8S9 216 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 FAM206AQ9NX38 181 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 PLEK2Q9NYT0 353 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 COQ3Q9NZJ6 369 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 NUFIP1Q9UHK0 495 aaKnown RBP6.5□□□□□ -1.37
VPS45-213ENST00000618148 IKZF2Q9UKS7 526 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 R4GMQ9 66 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 RTTNQ86VV8 2226 aa6.5□□□□□ -1.37
VPS45-213ENST00000618148 LOC100509620A0A075B734 347 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 PSMD9O00233 223 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 CCRL2O00421 344 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 GPRIN2O60269 458 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 SC5DO75845 299 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 IGLV3-1P01715 115 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 APOC1P02654 83 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 ACSM4P0C7M7 580 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 PPP3CBP16298 524 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 GALP22466 123 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 GTF2A1P52655 376 aaPredicted RBP6.49□□□□□ -1.37
VPS45-213ENST00000618148 UBE2NP61088 152 aaKnown RBP6.49□□□□□ -1.37
VPS45-213ENST00000618148 MFGE8Q08431 387 aaPredicted RBP6.49□□□□□ -1.37
VPS45-213ENST00000618148 FAM27E3Q08E93 113 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 CDSNQ15517 529 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 TSC22D1Q15714 1073 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 XKRXQ6PP77 449 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 DRAM2Q6UX65 266 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 CATSPERDQ86XM0 798 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 PRSS35Q8N3Z0 413 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 AKR7LQ8NHP1 331 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 ITLN2Q8WWU7 325 aaPredicted RBP6.49□□□□□ -1.37
VPS45-213ENST00000618148 RNASE6Q93091 150 aaKnown RBP6.49□□□□□ -1.37
VPS45-213ENST00000618148 SPTSSAQ969W0 71 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 TMIGD2Q96BF3 282 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 S100PBPQ96BU1 408 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 DCLRE1CQ96SD1 692 aaKnown RBP6.49□□□□□ -1.37
VPS45-213ENST00000618148 DOK1Q99704 481 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 ACTR6Q9GZN1 396 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 G6PC2Q9NQR9 355 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 BATF3Q9NR55 127 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 CENPMQ9NSP4 180 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 FRRS1LQ9P0K9 344 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 SF3B6Q9Y3B4 125 aaKnown RBP6.49□□□□□ -1.37
VPS45-213ENST00000618148 GRIP1Q9Y3R0 1128 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 SPTBN1Q01082 2364 aaKnown RBP6.49□□□□□ -1.37
VPS45-213ENST00000618148 PRR14LQ5THK1 2151 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 ADGRG4Q8IZF6 3080 aa6.49□□□□□ -1.37
VPS45-213ENST00000618148 SMIM31A0A1B0GVY4 71 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms