RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 RAB3BP20337 219 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 CCR9P51686 369 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 RASGEF1BQ0VAM2 473 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 LAMTOR1Q6IAA8 161 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 IGFL2Q6UWQ7 119 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 FCRLAQ7L513 359 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 CPNE4Q96A23 557 aaPredicted RBP18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 NABP1Q96AH0 204 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 DEFB127Q9H1M4 99 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ABCG5Q9H222 651 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 HSPB11Q9Y547 144 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 CACNG2Q9Y698 323 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 A0A0B4J203 849 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 CDK2AP1O14519 115 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 RER1O15258 196 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 CYTIPO60759 359 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 PAHP00439 452 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ATF1P18846 271 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ANOS1P23352 680 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ARPC4P59998 168 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ZNF782Q6ZMW2 699 aaPredicted RBP18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 LINGO2Q7L985 606 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ZNF416Q9BWM5 594 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 PNRC2Q9NPJ4 139 aaKnown RBP18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 KCNMB2Q9Y691 235 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 R4GMQ9 66 aa18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 TNRC6AQ8NDV7 1962 aaKnown RBP18.2■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ZNF891A8MT65 544 aaPredicted RBP18.19■□□□□ 0.5
CNTNAP3B-212ENST00000617422 SAMD12Q8N8I0 201 aa18.19■□□□□ 0.5
CNTNAP3B-212ENST00000617422 MED28Q9H204 178 aa18.19■□□□□ 0.5
CNTNAP3B-212ENST00000617422 C1orf198Q9H425 327 aa18.19■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ZCCHC4Q9H5U6 513 aa18.19■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ING4Q9UNL4 249 aa18.19■□□□□ 0.5
CNTNAP3B-212ENST00000617422 RTTNQ86VV8 2226 aa18.19■□□□□ 0.5
CNTNAP3B-212ENST00000617422 TRAV8-7A0A075B6U6 113 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 TRBV5-7A0A0A0MS05 114 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 DHHO43323 396 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 WISP2O76076 250 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 EIF4EP06730 217 aaKnown RBP18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 SGCAQ16586 387 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ASPHD2Q6ICH7 369 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 FOXL2NBQ6ZUU3 175 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 FAM109AQ8N4B1 249 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 RBM24Q9BX46 236 aaKnown RBP18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 COMMD4Q9H0A8 199 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 PTTG3PQ9NZH4 202 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 POLR1DQ9Y2S0 133 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 C7orf66A4D0T2 115 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 GPR171O14626 319 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 AKR7A2O43488 359 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 H2BFMP0C1H6 154 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 EPXP11678 715 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ADRA2CP18825 462 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 SLC10A1Q14973 349 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 RSPO4Q2I0M5 234 aaPredicted RBP18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 DEGS2Q6QHC5 323 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 PHYHIPQ92561 330 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 DPAGT1Q9H3H5 408 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ACKR4Q9NPB9 350 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 FREM1Q5H8C1 2179 aa18.18■□□□□ 0.5
CNTNAP3B-212ENST00000617422 A0A0A6YYJ9 748 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 TMEM269A0A1B0GVZ9 245 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 P2RX3P56373 397 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ENDOGQ14249 297 aaKnown RBP18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 TMEM178AQ8NBL3 297 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 GPR148Q8TDV2 347 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 TMEM106AQ96A25 262 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ULBP2Q9BZM5 246 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 RANBP3Q9H6Z4 567 aaPredicted RBP18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 BRD7Q9NPI1 651 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 FAM206AQ9NX38 181 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 SPRR3Q9UBC9 169 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 RCE1Q9Y256 329 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 NUBP2Q9Y5Y2 271 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 CEP295Q9C0D2 2601 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 LANCL1O43813 399 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 CEACAM4O75871 244 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 STOMP27105 288 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 AAED1Q7RTV5 226 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 C9orf62Q8N4C0 152 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 FNDC9Q8TBE3 224 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 MED30Q96HR3 178 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ZDHHC11Q9H8X9 412 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 COPZ2Q9P299 210 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 OR52A1Q9UKL2 312 aa18.17■□□□□ 0.5
CNTNAP3B-212ENST00000617422 SMLR1H3BR10 107 aa18.16■□□□□ 0.5
CNTNAP3B-212ENST00000617422 EEF1E1O43324 174 aaKnown RBP18.16■□□□□ 0.5
CNTNAP3B-212ENST00000617422 OR3A3P47888 321 aa18.16■□□□□ 0.5
CNTNAP3B-212ENST00000617422 SNRPD2P62316 118 aaKnown RBP18.16■□□□□ 0.5
CNTNAP3B-212ENST00000617422 STAC2Q6ZMT1 411 aa18.16■□□□□ 0.5
CNTNAP3B-212ENST00000617422 OR5H6Q8NGV6 325 aa18.16■□□□□ 0.5
CNTNAP3B-212ENST00000617422 TRMT10AQ8TBZ6 339 aaKnown RBP18.16■□□□□ 0.5
CNTNAP3B-212ENST00000617422 ALKBH3Q96Q83 286 aaPredicted RBP18.16■□□□□ 0.5
CNTNAP3B-212ENST00000617422 NELFAQ9H3P2 528 aa18.16■□□□□ 0.5
CNTNAP3B-212ENST00000617422 B3GNT2Q9NY97 397 aa18.16■□□□□ 0.5
CNTNAP3B-212ENST00000617422 MSR1P21757 451 aa18.15■□□□□ 0.5
CNTNAP3B-212ENST00000617422 PITPNAQ00169 270 aa18.15■□□□□ 0.5
CNTNAP3B-212ENST00000617422 PDSS1Q5T2R2 415 aa18.15■□□□□ 0.5
CNTNAP3B-212ENST00000617422 BCL2L15Q5TBC7 163 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms