RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 OR13C3Q8NGS6 347 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 FGGYQ96C11 551 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 DTNBP1Q96EV8 351 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 MNTQ99583 582 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 WACQ9BTA9 647 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 OR2B2Q9GZK3 357 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 PBOV1Q9GZY1 135 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 MRPL15Q9P015 296 aaKnown RBP6.87□□□□□ -1.31
NEK3-207ENST00000617054 KLK13Q9UKR3 277 aa6.87□□□□□ -1.31
NEK3-207ENST00000617054 A0A096LPE4 126 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 A0A1W2PPZ6 126 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 KLRC4-KLRK1H3BQV0 150 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 KLK10O43240 276 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 DHHO43323 396 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 VAMP5O95183 116 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 TTRP02766 147 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 ITGA5P08648 1049 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 ACSM4P0C7M7 580 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 ABOP16442 354 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 CSRP1P21291 193 aaKnown RBP6.86□□□□□ -1.31
NEK3-207ENST00000617054 SLC6A9P48067 706 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 SOX8P57073 446 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 ZNF121P58317 390 aaPredicted RBP6.86□□□□□ -1.31
NEK3-207ENST00000617054 PAMR1Q6UXH9 720 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 FAM57BQ71RH2 274 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 CMTM4Q8IZR5 234 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 CADM3Q8N126 398 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 OR51D1Q8NGF3 324 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 NABP1Q96AH0 204 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 IP6K3Q96PC2 410 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 PRRG4Q9BZD6 226 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 PNRC2Q9NPJ4 139 aaKnown RBP6.86□□□□□ -1.31
NEK3-207ENST00000617054 FAIMQ9NVQ4 179 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 FAM206AQ9NX38 181 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 B4GALT7Q9UBV7 327 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 FBXO9Q9UK97 447 aaPredicted RBP6.86□□□□□ -1.31
NEK3-207ENST00000617054 LOC102725191A0A1B0GVB3 256 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 PLA2G10O15496 165 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 EEF1E1O43324 174 aaKnown RBP6.86□□□□□ -1.31
NEK3-207ENST00000617054 HRGP04196 525 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 HPNP05981 417 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 CD3GP09693 182 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 CAPZA2P47755 286 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 RFX2P48378 723 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 TNFSF10P50591 281 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 EFNB2P52799 333 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 FOXC1Q12948 553 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 ENDOGQ14249 297 aaKnown RBP6.86□□□□□ -1.31
NEK3-207ENST00000617054 SLC10A1Q14973 349 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 CEACAM16Q2WEN9 425 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 SFRP5Q5T4F7 317 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 BCL2L15Q5TBC7 163 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 TSPO2Q5TGU0 170 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 OR10K2Q6IF99 312 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 KLHL24Q6TFL4 600 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 TMEM54Q969K7 222 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 FAM71F1Q96KD3 344 aaPredicted RBP6.86□□□□□ -1.31
NEK3-207ENST00000617054 HDHD2Q9H0R4 259 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 C11orf54Q9H0W9 315 aaPredicted RBP6.86□□□□□ -1.31
NEK3-207ENST00000617054 OR5V1Q9UGF6 321 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 BOLA2-SMG1P6H3BVE0 249 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 K7EM74 188 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 TGM6O95932 706 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 RSPO1Q2MKA7 263 aaPredicted RBP6.86□□□□□ -1.31
NEK3-207ENST00000617054 ABHD12BQ7Z5M8 362 aaPredicted RBP6.86□□□□□ -1.31
NEK3-207ENST00000617054 C20orf196Q8IYI0 205 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 ZNF283Q8N7M2 679 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 AKR7LQ8NHP1 331 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 HAS2Q92819 552 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 ADAT3Q96EY9 351 aaPredicted RBP6.86□□□□□ -1.31
NEK3-207ENST00000617054 CYYR1Q96J86 154 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 SOSTQ9BQB4 213 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 NELFAQ9H3P2 528 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 CYSLTR2Q9NS75 346 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 PLEK2Q9NYT0 353 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 SPRR3Q9UBC9 169 aa6.86□□□□□ -1.31
NEK3-207ENST00000617054 KRT33AO76009 404 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 CD1AP06126 327 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 CCL2P13500 99 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 MSR1P21757 451 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 CX3CR1P49238 355 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 RRADP55042 308 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 RAB25P57735 213 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 ZNF57Q68EA5 555 aaPredicted RBP6.85□□□□□ -1.31
NEK3-207ENST00000617054 KRT74Q7RTS7 529 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 LRRC28Q86X40 367 aaPredicted RBP6.85□□□□□ -1.31
NEK3-207ENST00000617054 OR8B12Q8NGG6 310 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 OR5M9Q8NGP3 310 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 SYNPRQ8TBG9 265 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 CCDC32Q9BV29 185 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 CAMK2AQ9UQM7 478 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 KLF13Q9Y2Y9 288 aaPredicted RBP6.85□□□□□ -1.31
NEK3-207ENST00000617054 NOSIPQ9Y314 301 aaKnown RBP6.85□□□□□ -1.31
NEK3-207ENST00000617054 TRBV5-7A0A0A0MS05 114 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 ZNF878C9JN71 531 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 AIPO00170 330 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 SYT7O43581 403 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 GLSO94925 669 aaPredicted RBP6.85□□□□□ -1.31
NEK3-207ENST00000617054 ZNF708P17019 499 aa6.85□□□□□ -1.31
NEK3-207ENST00000617054 NPR2P20594 1047 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms