RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 RGP1Q92546 391 aaPredicted RBP6.98□□□□□ -1.29
PCDH9-205ENST00000614931 FCGR1BQ92637 280 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 RORBQ92753 470 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 S100PBPQ96BU1 408 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 YIPF6Q96EC8 236 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 MS4A3Q96HJ5 214 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 DCLRE1CQ96SD1 692 aaKnown RBP6.98□□□□□ -1.29
PCDH9-205ENST00000614931 MGLLQ99685 303 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 ATF6BQ99941 703 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 NAA50Q9GZZ1 169 aaKnown RBP6.98□□□□□ -1.29
PCDH9-205ENST00000614931 G6PC2Q9NQR9 355 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 CHCHD3Q9NX63 227 aaKnown RBP6.98□□□□□ -1.29
PCDH9-205ENST00000614931 PLEK2Q9NYT0 353 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 NPAP1Q9NZP6 1156 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 SLC22A13Q9Y226 551 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 SLC25A15Q9Y619 301 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 DPPA5A6NC42 116 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 OR5H1A6NKK0 313 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 OGG1O15527 345 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 UBL3O95164 117 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 THBDP07204 575 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 H2BFMP0C1H6 154 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 HSMCR30P0CW71 290 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 SLC2A1P11166 492 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 CCL2P13500 99 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 ZNF14P17017 642 aaPredicted RBP6.97□□□□□ -1.29
PCDH9-205ENST00000614931 IL32P24001 234 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 HTR5AP47898 357 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 PCBD1P61457 104 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 RAB1AP62820 205 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 RPS25P62851 125 aaKnown RBP6.97□□□□□ -1.29
PCDH9-205ENST00000614931 TGFBR3Q03167 851 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 MLLT11Q13015 90 aaPredicted RBP6.97□□□□□ -1.29
PCDH9-205ENST00000614931 TPBGQ13641 420 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 SNTB1Q13884 538 aaKnown RBP6.97□□□□□ -1.29
PCDH9-205ENST00000614931 CDK5R1Q15078 307 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 TESK1Q15569 626 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 SLC36A2Q495M3 483 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 WDR38Q5JTN6 314 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 LIPKQ5VXJ0 399 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 FOXB2Q5VYV0 432 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 DMKNQ6E0U4 476 aaPredicted RBP6.97□□□□□ -1.29
PCDH9-205ENST00000614931 TMEM53Q6P2H8 277 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 FDX2Q6P4F2 183 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 KCTD18Q6PI47 426 aaPredicted RBP6.97□□□□□ -1.29
PCDH9-205ENST00000614931 TMPRSS11AQ6ZMR5 421 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 PRSS45Q7RTY3 260 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 FAM220AQ7Z4H9 259 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 CDH24Q86UP0 819 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 CATSPERDQ86XM0 798 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 PHC2Q8IXK0 858 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 PRSS35Q8N3Z0 413 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 C17orf78Q8N4C9 275 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 PAQR4Q8N4S7 273 aaPredicted RBP6.97□□□□□ -1.29
PCDH9-205ENST00000614931 IL17RDQ8NFM7 739 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 OR13C5Q8NGS8 318 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 OR10AC1Q8NH08 325 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 OR1F12Q8NHA8 337 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 RNASE6Q93091 150 aaKnown RBP6.97□□□□□ -1.29
PCDH9-205ENST00000614931 LRRC46Q96FV0 321 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 TRMT61AQ96FX7 289 aaKnown RBP6.97□□□□□ -1.29
PCDH9-205ENST00000614931 PGLYRP3Q96LB9 341 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 C4orf45Q96LM5 186 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 COQ7Q99807 217 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 SOX7Q9BT81 388 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 C1QTNF6Q9BXI9 259 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 ACTR6Q9GZN1 396 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 HDHD2Q9H0R4 259 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 RBM38Q9H0Z9 239 aaKnown RBP6.97□□□□□ -1.29
PCDH9-205ENST00000614931 RNF121Q9H920 327 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 ISYNA1Q9NPH2 558 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 FAM206AQ9NX38 181 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 BABAM2Q9NXR7 383 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 ZNF319Q9P2F9 582 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 SF3B6Q9Y3B4 125 aaKnown RBP6.97□□□□□ -1.29
PCDH9-205ENST00000614931 TIMM10BQ9Y5J6 103 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 R4GMQ9 66 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 ABCA12Q86UK0 2595 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 OTOGQ6ZRI0 2925 aa6.97□□□□□ -1.29
PCDH9-205ENST00000614931 CREBBPQ92793 2442 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 FAM221AA4D161 298 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 OR4C45A6NMZ5 311 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 M0R135 149 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 ZNF254O75437 659 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 CTAG2O75638 210 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 IGLV1-44P01699 117 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 ACSM4P0C7M7 580 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 CPEP16870 476 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 CELP19835 753 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 GADD45AP24522 165 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 UGT2B10P36537 528 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 ARR3P36575 388 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 TGFBR1P36897 503 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 MAGEB1P43366 347 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 KIR2DL3P43628 341 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 TGM4P49221 684 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 CX3CR1P49238 355 aa6.96□□□□□ -1.3
PCDH9-205ENST00000614931 GDI2P50395 445 aaKnown RBP6.96□□□□□ -1.3
PCDH9-205ENST00000614931 IDH3GP51553 393 aaPredicted RBP6.96□□□□□ -1.3
PCDH9-205ENST00000614931 GBX2P52951 348 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms