RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 Q9UFV3 132 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 ABCA4P78363 2273 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 ARPC4-TTLL3A0A0A6YYG9 625 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 OR6C6A6NF89 314 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 E9PI62 339 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 ZNF701M0R085 212 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-212ENST00000613856 RER1O15258 196 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 MAGEB4O15481 346 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-212ENST00000613856 OGG1O15527 345 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 SGCEO43556 437 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 PLPP2O43688 288 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 SRSF10O75494 262 aaKnown RBP9.97□□□□□ -0.81
SLIRP-212ENST00000613856 UBL3O95164 117 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 GABARAPO95166 117 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 H2BFMP0C1H6 154 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 CD36P16671 472 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 ZNF32P17041 273 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 IGFBP2P18065 325 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 OTX1P32242 354 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-212ENST00000613856 PSMA6P60900 246 aaKnown RBP9.97□□□□□ -0.81
SLIRP-212ENST00000613856 ECH1Q13011 328 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 ZNF829Q3KNS6 432 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-212ENST00000613856 TBRG1Q3YBR2 411 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 CCDC92Q53HC0 331 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-212ENST00000613856 ELFN2Q5R3F8 820 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 C1QTNF12Q5T7M4 302 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 C9orf135Q5VTT2 229 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 LIPKQ5VXJ0 399 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 OR7E24Q6IFN5 339 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 P2RY8Q86VZ1 359 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 ANKRD13BQ86YJ7 626 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 TGIF2LYQ8IUE0 185 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 ZNF610Q8N9Z0 462 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 NANOS1Q8WY41 292 aaKnown RBP9.97□□□□□ -0.81
SLIRP-212ENST00000613856 RND1Q92730 232 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 SMIM19Q96E16 107 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 COQ7Q99807 217 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 ATF6BQ99941 703 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 FUNDC2Q9BWH2 189 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 OR2H1Q9GZK4 316 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 OPN3Q9H1Y3 402 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-212ENST00000613856 MOB1AQ9H8S9 216 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 GALNT8Q9NY28 637 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 ENPP5Q9UJA9 477 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 TIMM10BQ9Y5J6 103 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 CEPT1Q9Y6K0 416 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 R4GMQ9 66 aa9.97□□□□□ -0.81
SLIRP-212ENST00000613856 HRNRQ86YZ3 2850 aaPredicted RBP9.96□□□□□ -0.81
SLIRP-212ENST00000613856 PSMD9O00233 223 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 DVL2O14641 736 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 SYNGR3O43761 229 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 GPRIN2O60269 458 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 DOK2O60496 412 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 COX5BP10606 129 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 PSMB1P20618 241 aaKnown RBP9.96□□□□□ -0.82
SLIRP-212ENST00000613856 CRYGSP22914 178 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 PSMA1P25786 263 aaKnown RBP9.96□□□□□ -0.82
SLIRP-212ENST00000613856 GABRA5P31644 462 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 ARR3P36575 388 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 MMP16P51512 607 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 CCR9P51686 369 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 GTF2A1P52655 376 aaPredicted RBP9.96□□□□□ -0.82
SLIRP-212ENST00000613856 TMBIM6P55061 237 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 TFF3Q07654 80 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 TRAM1Q15629 374 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 GABRA6Q16445 453 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 KRTAP27-1Q3LI81 207 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 TIMM50Q3ZCQ8 353 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 FOXB2Q5VYV0 432 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF544Q6NX49 715 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 TMEM53Q6P2H8 277 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF474Q6S9Z5 364 aaPredicted RBP9.96□□□□□ -0.82
SLIRP-212ENST00000613856 SLC16A12Q6ZSM3 486 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 SPATC1Q76KD6 591 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 TMEM200AQ86VY9 491 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.96□□□□□ -0.82
SLIRP-212ENST00000613856 CLVS1Q8IUQ0 354 aaPredicted RBP9.96□□□□□ -0.82
SLIRP-212ENST00000613856 FGFBP3Q8TAT2 258 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 RAB2BQ8WUD1 216 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 PGLYRP3Q96LB9 341 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 C4orf45Q96LM5 186 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 DOK1Q99704 481 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 WNT5BQ9H1J7 359 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 OBP2BQ9NPH6 170 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 DLL4Q9NR61 685 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 CENPMQ9NSP4 180 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 PLEK2Q9NYT0 353 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 JKAMPQ9P055 326 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 SF3B6Q9Y3B4 125 aaKnown RBP9.96□□□□□ -0.82
SLIRP-212ENST00000613856 GRIP1Q9Y3R0 1128 aa9.96□□□□□ -0.82
SLIRP-212ENST00000613856 SIRT4Q9Y6E7 314 aaPredicted RBP9.96□□□□□ -0.82
SLIRP-212ENST00000613856 FLNAP21333 2647 aaKnown RBP9.95□□□□□ -0.82
SLIRP-212ENST00000613856 A0A096LPE4 126 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 A0A1W2PPZ6 126 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 CIB4A0PJX0 185 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 ACOD1A6NK06 481 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 FAM90A27PA6NNH2 459 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 A8MXE2 369 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 H3BSA7 217 aa9.95□□□□□ -0.82
SLIRP-212ENST00000613856 NOL3O60936 208 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms