RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ERCC1P07992 297 aaPredicted RBP11.41□□□□□ -0.58
MDC1-209ENST00000613547 SBK2P0C263 348 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 ACSM4P0C7M7 580 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 ALOX5APP20292 161 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 CAPGP40121 348 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 PRKXP51817 358 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 MALLQ13021 153 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 KRTAP27-1Q3LI81 207 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 DRAM2Q6UX65 266 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 SLC35F2Q8IXU6 374 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 C8orf59Q8N0T1 100 aaPredicted RBP11.41□□□□□ -0.58
MDC1-209ENST00000613547 ZNF283Q8N7M2 679 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 SYT3Q9BQG1 590 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 MROQ9BYG7 248 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 MRPL37Q9BZE1 423 aaKnown RBP11.41□□□□□ -0.58
MDC1-209ENST00000613547 SLCO1C1Q9NYB5 712 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 PCDHGB1Q9Y5G3 927 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 HSPE1-MOB4S4R3N1 261 aa11.41□□□□□ -0.58
MDC1-209ENST00000613547 AKAP6Q13023 2319 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 H7C417 338 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 M0R233 179 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 ZNF254O75437 659 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 CD8AP01732 235 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 LCATP04180 440 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 ZNF250P15622 560 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 OTX1P32242 354 aaPredicted RBP11.4□□□□□ -0.58
MDC1-209ENST00000613547 OPRL1P41146 370 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 HSPA13P48723 471 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 ERVS71-1P61550 626 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 ACTC1P68032 377 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 ACTA1P68133 377 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 ADARB1P78563 741 aaKnown RBP11.4□□□□□ -0.58
MDC1-209ENST00000613547 NKPD1Q17RQ9 610 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 SWI5Q1ZZU3 235 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 SPATA46Q5T0L3 261 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 ZNF691Q5VV52 312 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 C11orf71Q6IPW1 123 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 DEGS2Q6QHC5 323 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 LRRC75A-AS1Q8N1F1 130 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 SLC25A40Q8TBP6 338 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 KLF14Q8TD94 323 aaPredicted RBP11.4□□□□□ -0.58
MDC1-209ENST00000613547 SNX33Q8WV41 574 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 NRG4Q8WWG1 115 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 IGFBPL1Q8WX77 278 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 RNFT2Q96EX2 444 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 MYCBPQ99417 103 aaPredicted RBP11.4□□□□□ -0.58
MDC1-209ENST00000613547 C1QTNF5Q9BXJ0 243 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 CACNG6Q9BXT2 260 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 OR2J1Q9GZK6 312 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 IKZF2Q9UKS7 526 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 FZR1Q9UM11 496 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 STARD10Q9Y365 291 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 MAST4O15021 2626 aa11.4□□□□□ -0.58
MDC1-209ENST00000613547 PLCE1Q9P212 2302 aa11.4□□□□□ -0.59
MDC1-209ENST00000613547 IGLV3-9A0A075B6K5 115 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 OVOL3O00110 214 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 OR2T7P0C7T2 308 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 GABRB1P18505 474 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 CDKN1AP38936 164 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 CX3CR1P49238 355 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 PPOXP50336 477 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 HCCSP53701 268 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 CXCR4P61073 352 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 ROM1Q03395 351 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 MAD2L1BPQ15013 274 aaPredicted RBP11.39□□□□□ -0.59
MDC1-209ENST00000613547 RSPO1Q2MKA7 263 aaPredicted RBP11.39□□□□□ -0.59
MDC1-209ENST00000613547 MST1LQ2TV78 715 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 ZMAT1Q5H9K5 638 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 MBNL2Q5VZF2 373 aaKnown RBP11.39□□□□□ -0.59
MDC1-209ENST00000613547 ZNF322Q6U7Q0 402 aaPredicted RBP11.39□□□□□ -0.59
MDC1-209ENST00000613547 LRRN1Q6UXK5 716 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 COLCA1Q6ZS62 124 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 CCDC168Q8NDH2 2452 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 OR10H4Q8NGA5 316 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 OR2T27Q8NH04 317 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 MARS2Q96GW9 593 aaKnown RBP11.39□□□□□ -0.59
MDC1-209ENST00000613547 AMELYQ99218 206 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 DOK1Q99704 481 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 FOXC2Q99958 501 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 GSX2Q9BZM3 304 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 MS4A5Q9H3V2 200 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 BARX1Q9HBU1 254 aaPredicted RBP11.39□□□□□ -0.59
MDC1-209ENST00000613547 ZNF701Q9NV72 531 aaPredicted RBP11.39□□□□□ -0.59
MDC1-209ENST00000613547 CGGBP1Q9UFW8 167 aaPredicted RBP11.39□□□□□ -0.59
MDC1-209ENST00000613547 KLHDC2Q9Y2U9 406 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 RPL36Q9Y3U8 105 aaKnown RBP11.39□□□□□ -0.59
MDC1-209ENST00000613547 NBPF19A0A087WUL8 3843 aa11.39□□□□□ -0.59
MDC1-209ENST00000613547 PLSCR5A0PG75 271 aa11.38□□□□□ -0.59
MDC1-209ENST00000613547 CYSRT1A8MQ03 144 aa11.38□□□□□ -0.59
MDC1-209ENST00000613547 CLIC3O95833 236 aa11.38□□□□□ -0.59
MDC1-209ENST00000613547 FADS2O95864 444 aaKnown RBP11.38□□□□□ -0.59
MDC1-209ENST00000613547 IGHV3-13P01766 116 aa11.38□□□□□ -0.59
MDC1-209ENST00000613547 KRT8P05787 483 aa11.38□□□□□ -0.59
MDC1-209ENST00000613547 ANXA2P07355 339 aaKnown RBP11.38□□□□□ -0.59
MDC1-209ENST00000613547 DBTP11182 482 aaKnown RBP11.38□□□□□ -0.59
MDC1-209ENST00000613547 RAC2P15153 192 aa11.38□□□□□ -0.59
MDC1-209ENST00000613547 PTH2RP49190 550 aa11.38□□□□□ -0.59
MDC1-209ENST00000613547 RIDAP52758 137 aaKnown RBP11.38□□□□□ -0.59
MDC1-209ENST00000613547 ART1P52961 327 aa11.38□□□□□ -0.59
MDC1-209ENST00000613547 AQP4P55087 323 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms