RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 DEFA6Q01524 100 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 TMEM128Q5BJH2 165 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 TMEM196Q5HYL7 178 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 PRAMEF20Q5VT98 475 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 CORO6Q6QEF8 472 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 PLXDC2Q6UX71 529 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 TRILQ7L0X0 811 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 SECTM1Q8WVN6 248 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 IL1F10Q8WWZ1 152 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 OIT3Q8WWZ8 545 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 KCNJ15Q99712 375 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 PIGQQ9BRB3 760 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 EMC6Q9BV81 110 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 TINAGL1Q9GZM7 467 aaPredicted RBP9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 LRP12Q9Y561 859 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 RALGAPA2Q2PPJ7 1873 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 BCAT2O15382 392 aaPredicted RBP9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 CTSVO60911 334 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 DFFBO76075 338 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 IFNA10P01566 189 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 RAB31Q13636 194 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 CLINT1Q14677 625 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 B3GNTL1Q67FW5 361 aaPredicted RBP9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 RBMS3Q6XE24 437 aaKnown RBP9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 SLC38A9Q8NBW4 561 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 OR52H1Q8NGJ2 320 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 OR51A4Q8NGJ6 313 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 ANKRD9Q96BM1 317 aaPredicted RBP9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 SEH1LQ96EE3 360 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 KTI12Q96EK9 354 aaPredicted RBP9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 MRGPRX1Q96LB2 322 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 GPR137Q96N19 417 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 ZNF2Q9BSG1 426 aaPredicted RBP9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 PRELID3BQ9Y3B1 194 aa9.87□□□□□ -0.83
CDC42EP3-206ENST00000611976 TRIM64BA6NI03 449 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 VAMP5O95183 116 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 HOXC4P09017 264 aaPredicted RBP9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 CXCL3P19876 107 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 FCGR2CP31995 323 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 CD80P33681 288 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 ZNF136P52737 540 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 KLF9Q13886 244 aaPredicted RBP9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 Q6ZRG5 221 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 OR56B2PQ8NGI1 322 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 TSLPQ969D9 159 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 NKX3-1Q99801 234 aaPredicted RBP9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 GPR84Q9NQS5 396 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 ASH2LQ9UBL3 628 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 ZNF223Q9UK11 482 aaPredicted RBP9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 TMEM272A0A1B0GTI8 110 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 VSTM5A8MXK1 200 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 S100A8P05109 93 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 PTHLHP12272 177 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 HOXB3P14651 431 aaPredicted RBP9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 FOLR1P15328 257 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 SUMO3P55854 103 aaPredicted RBP9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 ERVK-16P61578 105 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 ECH1Q13011 328 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 KCNIP4Q6PIL6 250 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 DPPA2Q7Z7J5 298 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 ZNF611Q8N823 705 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 GPA33Q99795 319 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 ZNF275Q9NSD4 429 aaPredicted RBP9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 TDRD15B5MCY1 1934 aaKnown RBP9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 LRP5LA4QPB2 252 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 E5RGE8 158 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 MRPL33O75394 65 aaKnown RBP9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 PWWP2BQ6NUJ5 590 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 MAML2Q8IZL2 1156 aaPredicted RBP9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 CPT1CQ8TCG5 803 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 OR6C1Q96RD1 312 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 RAB9BQ9NP90 201 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 NSG2Q9Y328 171 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 FLVCR1Q9Y5Y0 555 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 WNT11O96014 354 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 ENPP1P22413 925 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 IKZF1Q13422 519 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 PHLDA2Q53GA4 152 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 GRAMD2AQ8IUY3 354 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 LSMEM1Q8N8F7 131 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 UQCC2Q9BRT2 126 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 C12orf10Q9HB07 376 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 FBXO34Q9NWN3 711 aa9.86□□□□□ -0.83
CDC42EP3-206ENST00000611976 ZNF236Q9UL36 1845 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 TRIP12Q14669 1992 aaPredicted RBP9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 A0A1W2PPV9 198 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 C2orf72A6NCS6 295 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 SHOXO15266 292 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 MYOGP15173 224 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 HOXD11P31277 338 aaPredicted RBP9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 IFITM2Q01629 132 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 LYSMD4Q5XG99 296 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 KIAA0907Q7Z7F0 614 aaPredicted RBP9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 ABI3BPQ7Z7G0 1075 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 ZNF687Q8N1G0 1237 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 ZNF485Q8NCK3 441 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 OR1S2Q8NGQ3 325 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 PTP4A1Q93096 173 aa9.85□□□□□ -0.83
CDC42EP3-206ENST00000611976 MRPL38Q96DV4 380 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms