RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 TWSG1Q9GZX9 223 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 POFUT1Q9H488 388 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 PLPP3O14495 311 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 PRKACBP22694 351 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 AKR1C2P52895 323 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 RIPPLY1Q0D2K3 151 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 LINC00303Q3SY05 128 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 ZNF684Q5T5D7 378 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 ZNF585AQ6P3V2 769 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 ROBO4Q8WZ75 1007 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 ALKBH3Q96Q83 286 aaPredicted RBP11.81□□□□□ -0.52
TCF3-220ENST00000611869 ZCCHC4Q9H5U6 513 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 C12orf49Q9H741 205 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 ASF1BQ9NVP2 202 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 OR5V1Q9UGF6 321 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 ZNF223Q9UK11 482 aaPredicted RBP11.81□□□□□ -0.52
TCF3-220ENST00000611869 PCDHGA5Q9Y5G8 931 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 ZNF705EA8MWA4 302 aaPredicted RBP11.81□□□□□ -0.52
TCF3-220ENST00000611869 DHHO43323 396 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 EPPINO95925 133 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 ABOP16442 354 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 CAV2P51636 162 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 SELENOVP59797 346 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 CLVS2Q5SYC1 327 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 OR4C16Q8NGL9 310 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 UPRTQ96BW1 309 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 SLCO1B1Q9Y6L6 691 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 NLRC5Q86WI3 1866 aa11.81□□□□□ -0.52
TCF3-220ENST00000611869 CHRM2P08172 466 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 ADH6P28332 368 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 TAS2R46P59540 309 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 LIPHQ8WWY8 451 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 FER1L6-AS2Q96M78 137 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 SMIM3Q9BZL3 60 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 UCK1Q9HA47 277 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 MLXQ9UH92 298 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 PLXNA3P51805 1871 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 TEX51A0A1B0GUA7 166 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 M0R036 132 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 RER1O15258 196 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 ZIC2O95409 532 aaPredicted RBP11.8□□□□□ -0.52
TCF3-220ENST00000611869 ADGRG3Q86Y34 549 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 RNF128Q8TEB7 428 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 NICN1Q9BSH3 213 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 TRAPPC2LH3BP13 241 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 RPS18P62269 152 aaKnown RBP11.8□□□□□ -0.52
TCF3-220ENST00000611869 WDR74Q6RFH5 385 aaPredicted RBP11.8□□□□□ -0.52
TCF3-220ENST00000611869 CREB3L2Q70SY1 520 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 PLPP5Q8NEB5 264 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 OR10AC1Q8NH08 325 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 ZFAND1Q8TCF1 268 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 DNTTIP1Q9H147 329 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 ZNF587BE7ETH6 402 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 BET1O15155 118 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 XRCC3O43542 346 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 CBR3O75828 277 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 B4GALT1P15291 398 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 GNB3P16520 340 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 IL11RAQ14626 422 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 NOXO1Q8NFA2 376 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 SEMA6DQ8NFY4 1073 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 OR52B4Q8NGK2 314 aa11.8□□□□□ -0.52
TCF3-220ENST00000611869 AGPAT2O15120 278 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 OGG1O15527 345 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 PMS2P2O95744 297 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 ZNF658BQ4V348 819 aaPredicted RBP11.79□□□□□ -0.52
TCF3-220ENST00000611869 FHL5Q5TD97 284 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 SLC25A45Q8N413 288 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 CCDC71LQ8N9Z2 235 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 ZNF721Q8TF20 911 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 MAFIPQ8WZ33 124 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 CTHRC1Q96CG8 243 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 MYLKQ15746 1914 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 A0A096LPE4 126 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 A0A1W2PPZ6 126 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 ZNF814B7Z6K7 855 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 CCL11P51671 97 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 ACSM1Q08AH1 577 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 PCK2Q16822 640 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 UNQ6126/PRO20091Q6UXV3 157 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 RASL10BQ96S79 203 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 FRRS1LQ9P0K9 344 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 MED12Q93074 2177 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 A0A1B0GTQ1 180 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 SDCBPO00560 298 aaPredicted RBP11.79□□□□□ -0.52
TCF3-220ENST00000611869 PLA2G10O15496 165 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 CLDN15P56746 228 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 WIPI1Q5MNZ9 446 aaPredicted RBP11.79□□□□□ -0.52
TCF3-220ENST00000611869 LIX1LQ8IVB5 337 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 ZNF768Q9H5H4 540 aaKnown RBP11.79□□□□□ -0.52
TCF3-220ENST00000611869 MOB1AQ9H8S9 216 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 C12orf10Q9HB07 376 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 SCPEP1Q9HB40 452 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 GLTPQ9NZD2 209 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 ZNF175Q9Y473 711 aa11.79□□□□□ -0.52
TCF3-220ENST00000611869 S100A9P06702 114 aaKnown RBP11.78□□□□□ -0.52
TCF3-220ENST00000611869 NGFRP08138 427 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 GLI4P10075 376 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 PI3P19957 117 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms