RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 PCDHB16Q9NRJ7 776 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 IGKV1D-42A0A075B6H8 117 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 CPN1P15169 458 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 EPHA4P54764 986 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 SSBP1Q04837 148 aaKnown RBP7.8□□□□□ -1.16
LIG4-204ENST00000611712 LINC01590Q5TEZ4 76 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 UNQ9370/PRO34162Q6UXP9 181 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 PGAP1Q75T13 922 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 ZNF565Q8N9K5 539 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 OR51A2Q8NGJ7 313 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 MFSD8Q8NHS3 518 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 FLVCR1-AS1Q8TAF5 88 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 HGDQ93099 445 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 BORCS8Q96FH0 119 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 GPX7Q96SL4 187 aaPredicted RBP7.8□□□□□ -1.16
LIG4-204ENST00000611712 AMELYQ99218 206 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 OR10A2Q9H208 303 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 ZFP64Q9NPA5 681 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 SLC17A5Q9NRA2 495 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 CA10Q9NS85 328 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 KIF25Q9UIL4 384 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 PCDHGA5Q9Y5G8 931 aa7.8□□□□□ -1.16
LIG4-204ENST00000611712 J3QRE1 110 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 UPK3AO75631 287 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 LYPD3O95274 346 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 PI3P19957 117 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 PVALBP20472 110 aaPredicted RBP7.79□□□□□ -1.16
LIG4-204ENST00000611712 CDAP32320 146 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 CX3CR1P49238 355 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 FOXL2P58012 376 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 VAMP2P63027 116 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 THEM4Q5T1C6 240 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 ADGRG3Q86Y34 549 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 SULF2Q8IWU5 870 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 PIGTQ969N2 578 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 ARPC5LQ9BPX5 153 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 GDF2Q9UK05 429 aaPredicted RBP7.79□□□□□ -1.16
LIG4-204ENST00000611712 BORCS7-ASMTA0A0B4J1R7 106 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 ANKUB1A6NFN9 424 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 D6RAR5 112 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 TGFBR3LH3BV60 316 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 M0R036 132 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 BGLAPP02818 100 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 IFI6P09912 130 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 EIF1P41567 113 aaKnown RBP7.79□□□□□ -1.16
LIG4-204ENST00000611712 DUSP3P51452 185 aaPredicted RBP7.79□□□□□ -1.16
LIG4-204ENST00000611712 MTCP1P56278 107 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 TAGLNQ01995 201 aaKnown RBP7.79□□□□□ -1.16
LIG4-204ENST00000611712 MFGE8Q08431 387 aaPredicted RBP7.79□□□□□ -1.16
LIG4-204ENST00000611712 C19orf57Q0VDD7 668 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 ACTBL2Q562R1 376 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 B3GNTL1Q67FW5 361 aaPredicted RBP7.79□□□□□ -1.16
LIG4-204ENST00000611712 FNDC9Q8TBE3 224 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 PPP1R1CQ8WVI7 109 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 NAT6Q93015 286 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 ZNF426Q9BUY5 554 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 HRH4Q9H3N8 390 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 ZCCHC4Q9H5U6 513 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 MDC1Q14676 2089 aaKnown RBP7.79□□□□□ -1.16
LIG4-204ENST00000611712 A0A0A6YYH2 397 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 A6NJ64 397 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 SIGLEC6O43699 453 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 AVPR2P30518 371 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 GALNSP34059 522 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 KIR3DL2P43630 455 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 TAS2R46P59540 309 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 GPR85P60893 370 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 ZNF616Q08AN1 781 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 MFAP5Q13361 173 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 PDSS1Q5T2R2 415 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 TCEAL6Q6IPX3 200 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 CPEB2Q7Z5Q1 589 aaKnown RBP7.79□□□□□ -1.16
LIG4-204ENST00000611712 C9orf40Q8IXQ3 194 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 MARCH1Q8TCQ1 289 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 ST8SIA4Q92187 359 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 CNTNAP3BQ96NU0 1288 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 SMIM3Q9BZL3 60 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 ZNF700Q9H0M5 742 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 SAV1Q9H4B6 383 aaPredicted RBP7.79□□□□□ -1.16
LIG4-204ENST00000611712 SLC5A6Q9Y289 635 aa7.79□□□□□ -1.16
LIG4-204ENST00000611712 OR2F2O95006 317 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 ADRA2CP18825 462 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 DHRS2Q13268 280 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 OR2F1Q13607 317 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 CLPPQ16740 277 aaPredicted RBP7.78□□□□□ -1.16
LIG4-204ENST00000611712 LAMTOR1Q6IAA8 161 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 RABEPKQ7Z6M1 372 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 OR4D10Q8NGI6 311 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 ASB5Q8WWX0 329 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 OIT3Q8WWZ8 545 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 ZNF649Q9BS31 505 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 C1QTNF6Q9BXI9 259 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 ABI3Q9P2A4 366 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 OPN4Q9UHM6 478 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 B3GALT1Q9Y5Z6 326 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 NSG1A0A0A6YYJ2 146 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 LINC00862A6NCI5 91 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 TUBAL3A6NHL2 446 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 RFPL4AA6NLU0 287 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 GJE1A6NN92 205 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms