RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 FOXB1Q99853 325 aa6.54□□□□□ -1.36
CSDE1-218ENST00000610726 PSD2Q9BQI7 771 aa6.54□□□□□ -1.36
CSDE1-218ENST00000610726 ZNF286AQ9HBT8 521 aa6.54□□□□□ -1.36
CSDE1-218ENST00000610726 EXOSC3Q9NQT5 275 aaKnown RBP6.54□□□□□ -1.36
CSDE1-218ENST00000610726 UFSP2Q9NUQ7 469 aa6.54□□□□□ -1.36
CSDE1-218ENST00000610726 FBXO4Q9UKT5 387 aa6.54□□□□□ -1.36
CSDE1-218ENST00000610726 NUP50Q9UKX7 468 aa6.54□□□□□ -1.36
CSDE1-218ENST00000610726 MDC1Q14676 2089 aaKnown RBP6.54□□□□□ -1.36
CSDE1-218ENST00000610726 A0A1B0GV50 99 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 SLC22A23A1A5C7 686 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 IMPA2O14732 288 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 EIF4EP06730 217 aaKnown RBP6.53□□□□□ -1.36
CSDE1-218ENST00000610726 PATE4P0C8F1 98 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 CD53P19397 219 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 SSTR2P30874 369 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 CD79BP40259 229 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 RBP2P50120 134 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 AGFG1P52594 562 aaKnown RBP6.53□□□□□ -1.36
CSDE1-218ENST00000610726 FGL1Q08830 312 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 FXNQ16595 210 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 PCK2Q16822 640 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 ISXQ2M1V0 245 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 TBC1D28Q2M2D7 210 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 HACD4Q5VWC8 232 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 FAAP20Q6NZ36 180 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 Q6ZNX1 250 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 BTLAQ7Z6A9 289 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 OR10D3Q8NH80 312 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 SLC7A6Q92536 515 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 SLIRPQ9GZT3 109 aaKnown RBP6.53□□□□□ -1.36
CSDE1-218ENST00000610726 MFFQ9GZY8 342 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 FBXL2Q9UKC9 423 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 TRAPPC2LQ9UL33 140 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 TRAV17A0A0B4J275 112 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 PLPP3O14495 311 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 SPDEFO95238 335 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 PMP2P02689 132 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 EPXP11678 715 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 FAHP16930 419 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 PCMT1P22061 227 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 GALNSP34059 522 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 ACAA2P42765 397 aaKnown RBP6.53□□□□□ -1.36
CSDE1-218ENST00000610726 MEOX1P50221 254 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 SLC25A1P53007 311 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 RAC1P63000 192 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 RBM39Q14498 530 aaKnown RBP6.53□□□□□ -1.36
CSDE1-218ENST00000610726 C2orf76Q3KRA6 126 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 LINC00299Q6ZSB3 139 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 ZNF687Q8N1G0 1237 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 OR51S1Q8NGJ8 323 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 SECTM1Q8WVN6 248 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 ZCCHC4Q9H5U6 513 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 UTRNP46939 3433 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 NYNRINQ9P2P1 1898 aaKnown RBP6.53□□□□□ -1.36
CSDE1-218ENST00000610726 BORCS7-ASMTA0A0B4J1R7 106 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 MASP2O00187 686 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 BHLHE40O14503 412 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 GLI4P10075 376 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 CRYBB2P43320 205 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 CCR9P51686 369 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 TAS2R31P59538 309 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 TAS2R20P59543 309 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 INPP5JQ15735 1006 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-218ENST00000610726 TAF9Q16594 264 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 BEX5Q5H9J7 111 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 WDR38Q5JTN6 314 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 SLC16A12Q6ZSM3 486 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 GDPD3Q7L5L3 318 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 FNDC9Q8TBE3 224 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 DCUN1D4Q92564 292 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 SLC35B4Q969S0 331 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 RBM38Q9H0Z9 239 aaKnown RBP6.53□□□□□ -1.36
CSDE1-218ENST00000610726 UBQLN2Q9UHD9 624 aa6.53□□□□□ -1.36
CSDE1-218ENST00000610726 DOCK4Q8N1I0 1966 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 EFSO43281 561 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 SMIM10L1P0DMW3 83 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 FABP6P51161 128 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 PRSS12P56730 875 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 FCN2Q15485 313 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 BAK1Q16611 211 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 WDR88Q6ZMY6 472 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-218ENST00000610726 EXD3Q8N9H8 876 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 OR52H1Q8NGJ2 320 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 OR51F2Q8NH61 342 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF486Q96H40 463 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-218ENST00000610726 SMIM10Q96HG1 83 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 OR2M2Q96R28 347 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 TAS2R3Q9NYW6 316 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 BOLA1Q9Y3E2 137 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 ZFHX2Q9C0A1 2572 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-218ENST00000610726 A0A1W2PR80 420 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 SMCO3A2RU48 225 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 FAM221AA4D161 298 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 FIGNL2A6NMB9 653 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 CHRM2P08172 466 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 PTHLHP12272 177 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 HTR2BP41595 481 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 TAS2R46P59540 309 aa6.52□□□□□ -1.37
CSDE1-218ENST00000610726 CYCSP99999 105 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 314.9 ms