RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SIDT1Q9NXL6 827 aaKnown RBP11.31□□□□□ -0.6
CTCFL-218ENST00000608440 PITPNC1Q9UKF7 332 aa11.31□□□□□ -0.6
CTCFL-218ENST00000608440 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
CTCFL-218ENST00000608440 TRBV5-4A0A0C4DH59 114 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-218ENST00000608440 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-218ENST00000608440 PEX12O00623 359 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 GSTP1P09211 210 aaKnown RBP11.3□□□□□ -0.6
CTCFL-218ENST00000608440 BRS3P32247 399 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 CAMLGP49069 296 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 RAB32Q13637 225 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 DECR1Q16698 335 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 ZNF101Q8IZC7 436 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 ZNF321PQ8N8H1 164 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 PLPP5Q8NEB5 264 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 FAM210BQ96KR6 192 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 MAGEH1Q9H213 219 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 MRPL22Q9NWU5 206 aaKnown RBP11.3□□□□□ -0.6
CTCFL-218ENST00000608440 RAB22AQ9UL26 194 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 ICKQ9UPZ9 632 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 PLXNA3P51805 1871 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 M0QZK8 103 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 EIF1AYO14602 144 aaKnown RBP11.3□□□□□ -0.6
CTCFL-218ENST00000608440 KDELR3O43731 214 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 GGCTO75223 188 aaKnown RBP11.3□□□□□ -0.6
CTCFL-218ENST00000608440 PRH1P02810 166 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 EIF1AXP47813 144 aaKnown RBP11.3□□□□□ -0.6
CTCFL-218ENST00000608440 CLDN2P57739 230 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 DLK1P80370 383 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 RPUSD3Q6P087 351 aaKnown RBP11.3□□□□□ -0.6
CTCFL-218ENST00000608440 RSPO2Q6UXX9 243 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-218ENST00000608440 TPGS1Q6ZTW0 290 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 TMEM183AQ8IXX5 376 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 OR13C3Q8NGS6 347 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 OR9A1PQ8NGU1 263 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 OIT3Q8WWZ8 545 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 Q96M85 177 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 PLEKHA2Q9HB19 425 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 HSF4Q9ULV5 492 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 VWA8A3KMH1 1905 aa11.3□□□□□ -0.6
CTCFL-218ENST00000608440 A0A1B0GTH9 108 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 A0A1B0GVT2 93 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 A6NCN8 305 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 SCGB1D1O95968 90 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 OR5H8P0DN80 308 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 SERPINA2P20848 420 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 ACTA2P62736 377 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 ACTG2P63267 376 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 PRSS54Q6PEW0 395 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 SLCO4C1Q6ZQN7 724 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 TMEM229BQ8NBD8 167 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
CTCFL-218ENST00000608440 Q9N2J8 555 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 PTPRDP23468 1912 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 CHD3Q12873 2000 aaKnown RBP11.29□□□□□ -0.6
CTCFL-218ENST00000608440 FAM171A2A8MVW0 826 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 RAB27BO00194 218 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 FCMRO60667 390 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 CYB5R3P00387 301 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-218ENST00000608440 TIMP1P01033 207 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 CSTBP04080 98 aaKnown RBP11.29□□□□□ -0.6
CTCFL-218ENST00000608440 RHOCP08134 193 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 AKT2P31751 481 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 MC3RP41968 323 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 SLC9A3R2Q15599 337 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 SLC35E3Q7Z769 313 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 SLC35F2Q8IXU6 374 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 LYPD6BQ8NI32 183 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 SUN3Q8TAQ9 357 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 AQP10Q96PS8 301 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 NEUROD4Q9HD90 331 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 V9GYS6 101 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 FITM1A5D6W6 292 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 TMEM202A6NGA9 273 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 CBR3O75828 277 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 GCGP01275 180 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 IGHEP01854 428 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 SPTBP11277 2137 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 SLC2A5P22732 501 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 TAS2R38P59533 333 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 RHOAP61586 193 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 MRPL58Q14197 206 aaKnown RBP11.29□□□□□ -0.6
CTCFL-218ENST00000608440 C2orf76Q3KRA6 126 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 LEMD1Q68G75 181 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 GALNTL5Q7Z4T8 443 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 MRPL41Q8IXM3 137 aaKnown RBP11.29□□□□□ -0.6
CTCFL-218ENST00000608440 ZNF679Q8IYX0 411 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 LILRA3Q8N6C8 439 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-218ENST00000608440 OR1L6Q8NGR2 347 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 OR13D1Q8NGV5 346 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 C16orf58Q96GQ5 468 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 WFIKKN1Q96NZ8 548 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 CNN2Q99439 309 aaKnown RBP11.29□□□□□ -0.6
CTCFL-218ENST00000608440 STACQ99469 402 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 VN1R3Q9BXE9 311 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 NMES1Q9C002 83 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 ZDHHC3Q9NYG2 299 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 HAO2Q9NYQ3 351 aa11.29□□□□□ -0.6
CTCFL-218ENST00000608440 NLRC5Q86WI3 1866 aa11.28□□□□□ -0.6
CTCFL-218ENST00000608440 K7EPK0 472 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms