RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 ACOXLQ9NUZ1 547 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 TMEM100Q9NV29 134 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 C1RLQ9NZP8 487 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 SLAMF8Q9P0V8 285 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 ASH2LQ9UBL3 628 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 GRHPRQ9UBQ7 328 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 RIMS3Q9UJD0 308 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 SH3GLB1Q9Y371 365 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 FAM96BQ9Y3D0 163 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 ARHGAP32A7KAX9 2087 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 EDF1O60869 148 aaKnown RBP5.25□□□□□ -1.57
CUX1-220ENST00000607092 ATP5HO75947 161 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 TOX4O94842 621 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 ALX3O95076 343 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 THY1P04216 161 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 MELTFP08582 738 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 FBP1P09467 338 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 OMGP23515 440 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 FPR3P25089 353 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 RPL4P36578 427 aaKnown RBP5.25□□□□□ -1.57
CUX1-220ENST00000607092 CTXN1P60606 82 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 FGF12P61328 243 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 SEC61A1P61619 476 aaKnown RBP5.25□□□□□ -1.57
CUX1-220ENST00000607092 FMODQ06828 376 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 ECH1Q13011 328 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 TOP3AQ13472 1001 aaPredicted RBP5.25□□□□□ -1.57
CUX1-220ENST00000607092 NFYCQ13952 458 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 GPR139Q6DWJ6 353 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 DLEU7Q6UYE1 221 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 CCDC121Q6ZUS5 278 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 RRM2BQ7LG56 351 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 MAVSQ7Z434 540 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 ADCK1Q86TW2 530 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 OAFQ86UD1 273 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 IGFN1Q86VF2 1251 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 LDLRAD3Q86YD5 345 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 GLB1L2Q8IW92 636 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 CMTM4Q8IZR5 234 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 FITM2Q8N6M3 262 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 GJC3Q8NFK1 279 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 OR5R1Q8NH85 324 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 OR1F12Q8NHA8 337 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 Q8TCH9 128 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 PPP1R14AQ96A00 147 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 DACT3Q96B18 629 aaPredicted RBP5.25□□□□□ -1.57
CUX1-220ENST00000607092 COQ7Q99807 217 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 ECSITQ9BQ95 431 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 TMEM246Q9BRR3 403 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 PCGF1Q9BSM1 259 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 C1QTNF5Q9BXJ0 243 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 CHIAQ9BZP6 476 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 IKZF5Q9H5V7 419 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 MARCH7Q9H992 704 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 FN3KRPQ9HA64 309 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 KRCC1Q9NPI7 259 aaPredicted RBP5.25□□□□□ -1.57
CUX1-220ENST00000607092 PDP1Q9P0J1 537 aaPredicted RBP5.25□□□□□ -1.57
CUX1-220ENST00000607092 AURKCQ9UQB9 309 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 TMEM5Q9Y2B1 443 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 POLR1DQ9Y2S0 133 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 AP3M1Q9Y2T2 418 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 STARD10Q9Y365 291 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 DOCK11Q5JSL3 2073 aa5.25□□□□□ -1.57
CUX1-220ENST00000607092 TRAV38-1A0A0B4J264 116 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.24□□□□□ -1.57
CUX1-220ENST00000607092 TEX13CA0A0J9YWL9 993 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 A0A1B0GWJ7 208 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 IQCF6A8MYZ5 107 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 EFCAB9A8MZ26 197 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 ST8SIA5O15466 376 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 GPR137BO60478 399 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 GMDSO60547 372 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 KHDRBS3O75525 346 aaKnown RBP5.24□□□□□ -1.57
CUX1-220ENST00000607092 PF4P02776 101 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 CSF1P09603 554 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 TROVE2P10155 538 aaKnown RBP eCLIP5.24□□□□□ -1.573e-6■■□□□ 11.8
CUX1-220ENST00000607092 IFI30P13284 250 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 EEF1B2P24534 225 aaKnown RBP5.24□□□□□ -1.57
CUX1-220ENST00000607092 CRABP1P29762 137 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 CFHR2P36980 270 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 TGFBR2P37173 567 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 PSMB10P40306 273 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 PROK1P58294 105 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 MTPNP58546 118 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 PIN1Q13526 163 aaPredicted RBP5.24□□□□□ -1.57
CUX1-220ENST00000607092 ENDOGQ14249 297 aaKnown RBP5.24□□□□□ -1.57
CUX1-220ENST00000607092 LAPTM4AQ15012 233 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 TRAM2Q15035 370 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 SLC36A3Q495N2 470 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 COQ5Q5HYK3 327 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 METTL21CQ5VZV1 264 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 ASPHD2Q6ICH7 369 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 C1orf94Q6P1W5 598 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 BRD3OSQ6XYD6 125 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 Q6ZR03 302 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 Q6ZTK2 550 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 TRPM8Q7Z2W7 1104 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 MOGAT3Q86VF5 341 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 RBM45Q8IUH3 476 aaKnown RBP5.24□□□□□ -1.57
CUX1-220ENST00000607092 NKAIN4Q8IVV8 208 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 C10orf111Q8N326 155 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms