RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TMEM135Q86UB9 458 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 FBXO16Q8IX29 292 aaPredicted RBP3.75□□□□□ -1.81
LINC00397-202ENST00000606785 IFT20Q8IY31 132 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 FAM58AQ8N1B3 248 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 SLC39A11Q8N1S5 342 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 ZNF485Q8NCK3 441 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 OR9G4Q8NGQ1 327 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 OR9G1Q8NH87 305 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 RNASE11Q8TAA1 199 aaKnown RBP3.75□□□□□ -1.81
LINC00397-202ENST00000606785 SLC7A13Q8TCU3 470 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 MRAPQ8TCY5 172 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 MARC2Q969Z3 335 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 XPO6Q96QU8 1125 aaKnown RBP3.75□□□□□ -1.81
LINC00397-202ENST00000606785 TOLLIPQ9H0E2 274 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 METTL9Q9H1A3 318 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 ZNF302Q9NR11 478 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 VNN3Q9NY84 501 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 USH1CQ9Y6N9 552 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 TNRQ92752 1358 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 KDM5BQ9UGL1 1544 aa3.75□□□□□ -1.81
LINC00397-202ENST00000606785 ERCC6Q03468 1493 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 MRC2Q9UBG0 1479 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 KIR2DL5BA0A0G2JN68 375 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 KIR2DL5BA0A0G2JPC4 375 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 A0A1W2PPV4 95 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 TXNDC9O14530 226 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 SLC31A2O15432 143 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 CST8O60676 142 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 CRLF1O75462 422 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 CLIC3O95833 236 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 TIMP1P01033 207 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 HSPB1P04792 205 aaKnown RBP3.74□□□□□ -1.81
LINC00397-202ENST00000606785 TCP1P17987 556 aaKnown RBP3.74□□□□□ -1.81
LINC00397-202ENST00000606785 MAGP20916 626 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 TALDO1P37837 337 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 SLC1A2P43004 574 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 MAGEA2P43356 314 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 OMPP47874 163 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 NUP107P57740 925 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 UBE2G2P60604 165 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 CXCR4P61073 352 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 ATP6V0D1P61421 351 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 VSNL1P62760 191 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 ADARB1P78563 741 aaKnown RBP3.74□□□□□ -1.81
LINC00397-202ENST00000606785 FLI1Q01543 452 aaPredicted RBP3.74□□□□□ -1.81
LINC00397-202ENST00000606785 MADCAM1Q13477 382 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 ZNHIT3Q15649 155 aaPredicted RBP3.74□□□□□ -1.81
LINC00397-202ENST00000606785 FHOD3Q2V2M9 1422 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 CHRFAM7AQ494W8 412 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 KLHL12Q53G59 568 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 ZNF620Q6ZNG0 422 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 TMEM179BQ7Z7N9 219 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 KIR2DL5AQ8N109 375 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 TMEM104Q8NE00 496 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 VN1R2Q8NFZ6 395 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 OR5D18Q8NGL1 313 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 OR10J5Q8NHC4 309 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 KIR2DL5BQ8NHK3 375 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 BORCS5Q969J3 196 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 ZIM3Q96PE6 472 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 C12orf57Q99622 126 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 HES7Q9BYE0 225 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 PRRG3Q9BZD7 231 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 GAL3ST2Q9H3Q3 398 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 PLGRKTQ9HBL7 147 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 MYOZ1Q9NP98 299 aaPredicted RBP3.74□□□□□ -1.81
LINC00397-202ENST00000606785 XPNPEP1Q9NQW7 623 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 MS4A12Q9NXJ0 267 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 TAS2R1Q9NYW7 299 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 MTCH1Q9NZJ7 389 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 ZNF107Q9UII5 783 aaPredicted RBP3.74□□□□□ -1.81
LINC00397-202ENST00000606785 SLC17A4Q9Y2C5 497 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 ARL2BPQ9Y2Y0 163 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 RHBDD3Q9Y3P4 386 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 SLC22A7Q9Y694 548 aa3.74□□□□□ -1.81
LINC00397-202ENST00000606785 TAF1LQ8IZX4 1826 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 TMEM238C9JI98 176 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 ANKRD65E5RJM6 399 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 F8VP50 259 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 hCG_2039718K7EN88 272 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 NUPL2O15504 423 aaKnown RBP3.73□□□□□ -1.81
LINC00397-202ENST00000606785 AIREO43918 545 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 GMDSO60547 372 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 EIF4E2O60573 245 aaKnown RBP3.73□□□□□ -1.81
LINC00397-202ENST00000606785 EIF3GO75821 320 aaKnown RBP eCLIP3.73□□□□□ -1.81
LINC00397-202ENST00000606785 DTYMKP23919 212 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 COX7A1P24310 79 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 S100PP25815 95 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 TEAD1P28347 426 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 OR1E1P30953 314 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 EIF2B2P49770 351 aaKnown RBP3.73□□□□□ -1.81
LINC00397-202ENST00000606785 SUB1P53999 127 aaKnown RBP eCLIP3.73□□□□□ -1.81
LINC00397-202ENST00000606785 TAS2R19P59542 299 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 ARF6P62330 175 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 ARFRP1Q13795 201 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 RCAN2Q14206 197 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 COQ5Q5HYK3 327 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 ZNF470Q6ECI4 717 aa3.73□□□□□ -1.81
LINC00397-202ENST00000606785 ELP2Q6IA86 826 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms