RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 LMX1BO60663 402 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 SPARCP09486 303 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 DNASE1L1P49184 302 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 ADPRHP54922 357 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 RPL18Q07020 188 aaKnown RBP11.15□□□□□ -0.63
CDCA3-212ENST00000604599 OR2A2Q6IF42 318 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 FBXO42Q6P3S6 717 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 DBX2Q6ZNG2 339 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 CD300LFQ8TDQ1 290 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 SLC25A43Q8WUT9 341 aaPredicted RBP11.15□□□□□ -0.63
CDCA3-212ENST00000604599 RSPRY1Q96DX4 576 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 HHIPL1Q96JK4 782 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 OR8B4Q96RC9 309 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 PIGQQ9BRB3 760 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 EIF5A2Q9GZV4 153 aaKnown RBP11.15□□□□□ -0.63
CDCA3-212ENST00000604599 METTL8Q9H825 291 aaKnown RBP11.15□□□□□ -0.63
CDCA3-212ENST00000604599 PARP11Q9NR21 331 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 LRIT1Q9P2V4 623 aa11.15□□□□□ -0.63
CDCA3-212ENST00000604599 GDF2Q9UK05 429 aaPredicted RBP11.15□□□□□ -0.63
CDCA3-212ENST00000604599 ATXN7L1Q9ULK2 861 aaPredicted RBP11.15□□□□□ -0.63
CDCA3-212ENST00000604599 TRBV23OR9-2A0A075B6M9 112 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 LDLRAD4O15165 306 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 GPR75O95800 540 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 TSPAN15O95858 294 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 ADH1AP07327 375 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 HOXC4P09017 264 aaPredicted RBP11.14□□□□□ -0.63
CDCA3-212ENST00000604599 S100A2P29034 98 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF616Q08AN1 781 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF74Q16587 644 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 MIDNQ504T8 468 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 ACTBL2Q562R1 376 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 PHF19Q5T6S3 580 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 NSUN5P2Q63ZY6 315 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 CLEC18BQ6UXF7 455 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 LRRC75AQ8NAA5 344 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 KREMEN2Q8NCW0 462 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 OR4C3Q8NH37 302 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 LCN9Q8WX39 176 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 THRSPQ92748 146 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 RELTQ969Z4 430 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 TUBA4BQ9H853 241 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 POLE3Q9NRF9 147 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 EDDM13A0A1B0GTR0 161 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 HRKO00198 91 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 PRKNO60260 465 aaPredicted RBP11.14□□□□□ -0.63
CDCA3-212ENST00000604599 RENP00797 406 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 TIMP1P01033 207 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 RPS10P46783 165 aaKnown RBP11.14□□□□□ -0.63
CDCA3-212ENST00000604599 TMEM128Q5BJH2 165 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 MARCH3Q86UD3 253 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 ARRDC1Q8N5I2 433 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 SEMA6DQ8NFY4 1073 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 OR13C3Q8NGS6 347 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 OR2I1PQ8NGU4 316 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 TMEM230Q96A57 120 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 OPA3Q9H6K4 179 aa11.14□□□□□ -0.63
CDCA3-212ENST00000604599 UMAD1C9J7I0 102 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 OR10H2O60403 315 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 MOSPD3O75425 235 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 FGF19O95750 216 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 NDUFA6P56556 154 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 HMGN3Q15651 99 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 ANKRD55Q3KP44 614 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 EEF1A1P5Q5VTE0 462 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 TMEM184AQ6ZMB5 413 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 CYYR1Q96J86 154 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 SPACA7Q96KW9 195 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 C5orf66Q9H5L9 145 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 A0A0A6YYH2 397 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 A0A1B0GV50 99 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 A6NJ64 397 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 C11orf98E9PRG8 122 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 H7C1Q1 480 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 SOX1O00570 391 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-212ENST00000604599 GMFGO60234 142 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 IFNA17P01571 189 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 SFTPBP07988 381 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 HOXB5P09067 269 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 ADH5P11766 374 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 EIF5AP63241 154 aaKnown RBP11.13□□□□□ -0.63
CDCA3-212ENST00000604599 ZNHIT3Q15649 155 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-212ENST00000604599 GUK1Q16774 197 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 UNQ6494/PRO21346Q6UXR6 183 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 HOGA1Q86XE5 327 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF679Q8IYX0 411 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 NT5CQ8TCD5 201 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 PMM1Q92871 262 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 TOX2Q96NM4 488 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 OR2A5Q96R48 311 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 MESP1Q9BRJ9 268 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 MMP25Q9NPA2 562 aa11.13□□□□□ -0.63
CDCA3-212ENST00000604599 PQBP1O60828 265 aaKnown RBP11.12□□□□□ -0.63
CDCA3-212ENST00000604599 NDUFB7P17568 137 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 IGFBP3P17936 291 aaPredicted RBP11.12□□□□□ -0.63
CDCA3-212ENST00000604599 HOXA5P20719 270 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 MPZP25189 248 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 RIDAP52758 137 aaKnown RBP11.12□□□□□ -0.63
CDCA3-212ENST00000604599 TAS2R31P59538 309 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 PDZD11Q5EBL8 140 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 OR56B1Q8NGI3 324 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms