RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MOGAT3Q86VF5 341 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 JAZF1Q86VZ6 243 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 KLBQ86Z14 1044 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 PARP8Q8N3A8 854 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 COQ7Q99807 217 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 SLC30A2Q9BRI3 323 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 TMEM246Q9BRR3 403 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 HDHD2Q9H0R4 259 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 ZMAT3Q9HA38 289 aaKnown RBP11.02□□□□□ -0.65
RPS28-204ENST00000602140 MIOXQ9UGB7 285 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 SOX21Q9Y651 276 aaPredicted RBP11.02□□□□□ -0.65
RPS28-204ENST00000602140 LHFPL6Q9Y693 200 aa11.02□□□□□ -0.65
RPS28-204ENST00000602140 IQCF6A8MYZ5 107 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 F5H5P2 479 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 NDUFAB1O14561 156 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 CCDC22O60826 627 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 PPP1R3DO95685 299 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 RNASE1P07998 156 aaKnown RBP11.01□□□□□ -0.65
RPS28-204ENST00000602140 CPT2P23786 658 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 PRSS12P56730 875 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 DBPQ10586 325 aaPredicted RBP11.01□□□□□ -0.65
RPS28-204ENST00000602140 RSPO1Q2MKA7 263 aaPredicted RBP11.01□□□□□ -0.65
RPS28-204ENST00000602140 PRR31Q5SQ13 230 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 FAM201AQ5SY85 155 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 SMARCD3Q6STE5 483 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 BTNL3Q6UXE8 466 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 LRRN1Q6UXK5 716 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 HACD2Q6Y1H2 254 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 FAM86B1Q8N7N1 296 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 OR52J3Q8NH60 311 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 SLC25A28Q96A46 364 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 NEIL1Q96FI4 390 aaPredicted RBP11.01□□□□□ -0.65
RPS28-204ENST00000602140 PLEKHA8Q96JA3 519 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 C7orf34Q96L11 122 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 ERMAPQ96PL5 475 aaPredicted RBP11.01□□□□□ -0.65
RPS28-204ENST00000602140 HCAR1Q9BXC0 346 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 CCDC134Q9H6E4 229 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 UNKLQ9H9P5 680 aaKnown RBP11.01□□□□□ -0.65
RPS28-204ENST00000602140 SRA1Q9HD15 236 aaKnown RBP11.01□□□□□ -0.65
RPS28-204ENST00000602140 KRCC1Q9NPI7 259 aaPredicted RBP11.01□□□□□ -0.65
RPS28-204ENST00000602140 TMEM100Q9NV29 134 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 B9D1Q9UPM9 204 aa11.01□□□□□ -0.65
RPS28-204ENST00000602140 IGLV1-36A0A0B4J1U3 117 aa11□□□□□ -0.65
RPS28-204ENST00000602140 IGHV2-70DA0A0C4DH43 119 aa11□□□□□ -0.65
RPS28-204ENST00000602140 LRRC30A6NM36 301 aa11□□□□□ -0.65
RPS28-204ENST00000602140 KCNAB3O43448 404 aa11□□□□□ -0.65
RPS28-204ENST00000602140 HLA-DPB1P04440 258 aa11□□□□□ -0.65
RPS28-204ENST00000602140 PPIAL4GP0DN37 164 aa11□□□□□ -0.65
RPS28-204ENST00000602140 SELEP16581 610 aa11□□□□□ -0.65
RPS28-204ENST00000602140 FPR3P25089 353 aa11□□□□□ -0.65
RPS28-204ENST00000602140 PMELP40967 661 aa11□□□□□ -0.65
RPS28-204ENST00000602140 MTNR1AP48039 350 aa11□□□□□ -0.65
RPS28-204ENST00000602140 COX10Q12887 443 aa11□□□□□ -0.65
RPS28-204ENST00000602140 KRT72Q14CN4 511 aa11□□□□□ -0.65
RPS28-204ENST00000602140 SLC9A3R2Q15599 337 aa11□□□□□ -0.65
RPS28-204ENST00000602140 ZNF181Q2M3W8 571 aa11□□□□□ -0.65
RPS28-204ENST00000602140 ZNF404Q494X3 552 aa11□□□□□ -0.65
RPS28-204ENST00000602140 GLYATQ6IB77 296 aa11□□□□□ -0.65
RPS28-204ENST00000602140 LEG1Q6P5S2 330 aa11□□□□□ -0.65
RPS28-204ENST00000602140 CFAP77Q6ZQR2 320 aa11□□□□□ -0.65
RPS28-204ENST00000602140 COLCA1Q6ZS62 124 aa11□□□□□ -0.65
RPS28-204ENST00000602140 LINC00346Q8IVM7 164 aa11□□□□□ -0.65
RPS28-204ENST00000602140 C1orf87Q8N0U7 546 aa11□□□□□ -0.65
RPS28-204ENST00000602140 OR6V1Q8N148 313 aa11□□□□□ -0.65
RPS28-204ENST00000602140 OR8B3Q8NGG8 313 aa11□□□□□ -0.65
RPS28-204ENST00000602140 RAB40AQ8WXH6 277 aa11□□□□□ -0.65
RPS28-204ENST00000602140 TAF15Q92804 592 aaKnown RBP eCLIP11□□□□□ -0.65
RPS28-204ENST00000602140 UPRTQ96BW1 309 aa11□□□□□ -0.65
RPS28-204ENST00000602140 DHRS1Q96LJ7 313 aa11□□□□□ -0.65
RPS28-204ENST00000602140 OR8B2Q96RD0 313 aa11□□□□□ -0.65
RPS28-204ENST00000602140 NMNAT3Q96T66 252 aa11□□□□□ -0.65
RPS28-204ENST00000602140 PITX2Q99697 317 aa11□□□□□ -0.65
RPS28-204ENST00000602140 FUZQ9BT04 418 aa11□□□□□ -0.65
RPS28-204ENST00000602140 ZNF696Q9H7X3 374 aa11□□□□□ -0.65
RPS28-204ENST00000602140 DCAF13Q9NV06 445 aaKnown RBP11□□□□□ -0.65
RPS28-204ENST00000602140 ABCD2Q9UBJ2 740 aa11□□□□□ -0.65
RPS28-204ENST00000602140 SAMD4AQ9UPU9 718 aaKnown RBP11□□□□□ -0.65
RPS28-204ENST00000602140 TRAV40A0A0B4J280 105 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 A0A1B0GWJ7 208 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 F5H5K5 113 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 CLDN34H7C241 214 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 FSTL3O95633 263 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 PLATP00750 562 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 RENP00797 406 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 ACSM4P0C7M7 580 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 MDH1P40925 334 aaKnown RBP10.99□□□□□ -0.65
RPS28-204ENST00000602140 PITPNBP48739 271 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 PSME3P61289 254 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 IL13RA1P78552 427 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 GK2Q14410 553 aaPredicted RBP10.99□□□□□ -0.65
RPS28-204ENST00000602140 RFX4Q33E94 735 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 SLC18B1Q6NT16 456 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 C9orf139Q6ZV77 190 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 NLRC3Q7RTR2 1065 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 NAA40Q86UY6 237 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 SLC26A10Q8NG04 563 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 OR4K13Q8NH42 304 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 FANK1Q8TC84 345 aa10.99□□□□□ -0.65
RPS28-204ENST00000602140 DACT3Q96B18 629 aaPredicted RBP10.99□□□□□ -0.65
RPS28-204ENST00000602140 OR52D1Q9H346 318 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms