RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 MAP1BP46821 2468 aaKnown RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 M0R135 149 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 CRYGSP22914 178 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 FGF9P31371 208 aaPredicted RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 OTX1P32242 354 aaPredicted RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 SLC6A9P48067 706 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 TPTEP56180 551 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 ZNF121P58317 390 aaPredicted RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 SFRP5Q5T4F7 317 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 ZNF704Q6ZNC4 412 aaPredicted RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 NCCRP1Q6ZVX7 275 aaPredicted RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 KBTBD8Q8NFY9 601 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 ZNF799Q96GE5 643 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 PBOV1Q9GZY1 135 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 NUFIP1Q9UHK0 495 aaKnown RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 SLC22A13Q9Y226 551 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 ARPC4-TTLL3A0A0A6YYG9 625 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 ACOD1A6NK06 481 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 ATE1O95260 518 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 ANXA2P07355 339 aaKnown RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 UBCP0CG48 685 aaKnown RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 COX5BP10606 129 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 TUBA1BP68363 451 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 SOWAHCQ53LP3 525 aaPredicted RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 C22orf42Q6IC83 251 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 ZNF474Q6S9Z5 364 aaPredicted RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 USP43Q70EL4 1123 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 TUBA1AQ71U36 451 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 BHLHA15Q7RTS1 189 aaPredicted RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 TRMT61AQ96FX7 289 aaKnown RBP19.7■□□□□ 0.74
IRF3-228ENST00000601291 B3GNT2Q9NY97 397 aa19.7■□□□□ 0.74
IRF3-228ENST00000601291 IQCMA0A1B0GVH7 501 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 ZNF503-AS2A6NEH8 195 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 A8MXE2 369 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 CCL21O00585 134 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 IL32P24001 234 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 SPCS2Q15005 226 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 ODF4Q2M2E3 257 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 ACSM3Q53FZ2 586 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 DRAM2Q6UX65 266 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 PAMR1Q6UXH9 720 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 KCTD7Q96MP8 289 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 SP140LQ9H930 580 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 OBP2BQ9NPH6 170 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 SLC17A5Q9NRA2 495 aa19.69■□□□□ 0.74
IRF3-228ENST00000601291 GATBO75879 557 aaKnown RBP19.68■□□□□ 0.74
IRF3-228ENST00000601291 MRPL49Q13405 166 aaKnown RBP19.68■□□□□ 0.74
IRF3-228ENST00000601291 TSC22D1Q15714 1073 aa19.68■□□□□ 0.74
IRF3-228ENST00000601291 TMEM91Q6ZNR0 172 aa19.68■□□□□ 0.74
IRF3-228ENST00000601291 ELMOD2Q8IZ81 293 aa19.68■□□□□ 0.74
IRF3-228ENST00000601291 OR13C5Q8NGS8 318 aa19.68■□□□□ 0.74
IRF3-228ENST00000601291 NDNFQ8TB73 568 aa19.68■□□□□ 0.74
IRF3-228ENST00000601291 GPR148Q8TDV2 347 aa19.68■□□□□ 0.74
IRF3-228ENST00000601291 SLC7A6Q92536 515 aa19.68■□□□□ 0.74
IRF3-228ENST00000601291 THRSPQ92748 146 aa19.68■□□□□ 0.74
IRF3-228ENST00000601291 DCLRE1CQ96SD1 692 aaKnown RBP19.68■□□□□ 0.74
IRF3-228ENST00000601291 NOX3Q9HBY0 568 aa19.68■□□□□ 0.74
IRF3-228ENST00000601291 SHANK1Q9Y566 2161 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 TPRP12270 2363 aaKnown RBP19.67■□□□□ 0.74
IRF3-228ENST00000601291 TRIM64BA6NI03 449 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 SC5DO75845 299 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 DBHP09172 617 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 SLC2A1P11166 492 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 MAPK3P27361 379 aaPredicted RBP19.67■□□□□ 0.74
IRF3-228ENST00000601291 RPS11P62280 158 aaKnown RBP eCLIP19.67■□□□□ 0.74
IRF3-228ENST00000601291 RSPO1Q2MKA7 263 aaPredicted RBP19.67■□□□□ 0.74
IRF3-228ENST00000601291 KRTAP27-1Q3LI81 207 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 TMEM244Q5VVB8 128 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 FAM57BQ71RH2 274 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 CEACAM19Q7Z692 300 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 MDP1Q86V88 176 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 ZGRF1Q86YA3 2104 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 CPEB3Q8NE35 698 aaKnown RBP19.67■□□□□ 0.74
IRF3-228ENST00000601291 RGP1Q92546 391 aaPredicted RBP19.67■□□□□ 0.74
IRF3-228ENST00000601291 PPP1R14AQ96A00 147 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 RNF167Q9H6Y7 350 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 AMDHD2Q9Y303 409 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 N6AMT1Q9Y5N5 214 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 SPTA1P02549 2419 aa19.67■□□□□ 0.74
IRF3-228ENST00000601291 A0A1W2PPW3 197 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 TTRP02766 147 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 ISG15P05161 165 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 OCM2P0CE71 109 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 PSMB1P20618 241 aaKnown RBP19.66■□□□□ 0.74
IRF3-228ENST00000601291 ACHEP22303 614 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 STOMP27105 288 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 APEX1P27695 318 aaKnown RBP19.66■□□□□ 0.74
IRF3-228ENST00000601291 TGFBR1P36897 503 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 SERPINB10P48595 397 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 INSL4Q14641 139 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 Q499Y3 187 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 ZMAT1Q5H9K5 638 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 STAC2Q6ZMT1 411 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 TSEN15Q8WW01 171 aaKnown RBP19.66■□□□□ 0.74
IRF3-228ENST00000601291 PHYHIPQ92561 330 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 PGAM5Q96HS1 289 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 OR14A2Q96R54 314 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 DCSTAMPQ9H295 470 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 SLC24A3Q9HC58 644 aa19.66■□□□□ 0.74
IRF3-228ENST00000601291 ELOVL5Q9NYP7 299 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms