RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 ZNF322Q6U7Q0 402 aaPredicted RBP10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 TMEM108Q6UXF1 575 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 PAMR1Q6UXH9 720 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 TUBA1AQ71U36 451 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 PRSS48Q7RTY5 328 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 C1orf174Q8IYL3 243 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 ZNF679Q8IYX0 411 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 SYS1Q8N2H4 156 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 ZNF786Q8N393 782 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 CPEB3Q8NE35 698 aaKnown RBP10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 OR10H4Q8NGA5 316 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 OR1J2Q8NGS2 313 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 SLAMF6Q96DU3 332 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 RADILQ96JH8 1075 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 POM121L2Q96KW2 1035 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 OR8B4Q96RC9 309 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 NR1H4Q96RI1 486 aaPredicted RBP10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 ATF6BQ99941 703 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 MROQ9BYG7 248 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 ERVK13-1Q9NX77 482 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 NPAP1Q9NZP6 1156 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 KLHDC2Q9Y2U9 406 aa10.09□□□□□ -0.79
CHMP2A-207ENST00000600804 DSCAMO60469 2012 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 A0A1W2PPR1 153 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 A0A1W2PR80 420 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 TMEM129A0AVI4 362 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 DAPL1A0PJW8 107 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 ACOD1A6NK06 481 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 A6NNC1 897 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 ATE1O95260 518 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 ABHD16AO95870 558 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 CECR9P0C854 216 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 LIMS3P0CW19 117 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 LIMS4P0CW20 117 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 ZNF35P13682 527 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 FOSL1P15407 271 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 CD40P25942 277 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 STOMP27105 288 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 APLNRP35414 380 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 HTR5AP47898 357 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 IDH3GP51553 393 aaPredicted RBP10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 CHN2P52757 468 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 NR1H2P55055 460 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 NAAAQ02083 359 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 MRPL28Q13084 256 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 RAB39AQ14964 217 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 TBC1D28Q2M2D7 210 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 RSPO1Q2MKA7 263 aaPredicted RBP10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 BEX5Q5H9J7 111 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 PLEKHG7Q6ZR37 379 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 AHSA2Q719I0 299 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 STX19Q8N4C7 294 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 SLC30A7Q8NEW0 376 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 AKR7LQ8NHP1 331 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 LINC01560Q8TB33 94 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 THEM6Q8WUY1 208 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 SPTSSAQ969W0 71 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 MBD6Q96DN6 1003 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 AMELYQ99218 206 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 KCNJ15Q99712 375 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 RHNO1Q9BSD3 238 aa10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 ESRP2Q9H6T0 727 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 PAK1IP1Q9NWT1 392 aaPredicted RBP10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 CAB39Q9Y376 341 aaPredicted RBP10.08□□□□□ -0.8
CHMP2A-207ENST00000600804 LOC100509620A0A075B734 347 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 METTL15A6NJ78 407 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 DEFB108AA8MXU0 73 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 PRR32B1ATL7 298 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 PTGES3LE9PB15 166 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 CASKO14936 926 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 RGS10O43665 173 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 APOL3O95236 402 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 TNFAIP8O95379 198 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 MYL12AP19105 171 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 TUBG1P23258 451 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 DNASE1P24855 282 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 APEX1P27695 318 aaKnown RBP10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 C21orf33P30042 268 aaPredicted RBP10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 RGS6P49758 472 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 GDI2P50395 445 aaKnown RBP10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 MMP16P51512 607 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 HCCSP53701 268 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 IRF3Q14653 427 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 NCMAPQ5T1S8 102 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 DRAM2Q6UX65 266 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 COLCA1Q6ZS62 124 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 SSX6Q7RTT6 188 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 PRIMA1Q86XR5 153 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 WFDC8Q8IUA0 241 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 RFLNBQ8N5W9 214 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 OR52N1Q8NH53 320 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 SMAP2Q8WU79 429 aaPredicted RBP10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 ITFG2Q969R8 447 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 MS4A3Q96HJ5 214 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 MDFIQ99750 246 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 TMEM204Q9BSN7 226 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 ALG8Q9BVK2 526 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 ZNF696Q9H7X3 374 aa10.07□□□□□ -0.8
CHMP2A-207ENST00000600804 TUBG2Q9NRH3 451 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms