RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 PPP1R3DO95685 299 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 HLA-DPB1P04440 258 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 H1F0P07305 194 aaKnown RBP10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 WNT2P09544 360 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 RAC2P15153 192 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 ANOS1P23352 680 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 PMELP40967 661 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 OMPP47874 163 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 CENPAP49450 140 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 RASSF2P50749 326 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 PSME3P61289 254 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 LSM6P62312 80 aaKnown RBP10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 GNB2P62879 340 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 PAX8Q06710 450 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 PRR31Q5SQ13 230 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 FBXW12Q6X9E4 464 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 RRM2BQ7LG56 351 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 KLBQ86Z14 1044 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 LINC00346Q8IVM7 164 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 GLB1L2Q8IW92 636 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 OR8G5Q8NG78 346 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 DACT3Q96B18 629 aaPredicted RBP10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 GPX7Q96SL4 187 aaPredicted RBP10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 TMEM246Q9BRR3 403 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 MS4A7Q9GZW8 240 aaPredicted RBP10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 FN3KQ9H479 309 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 TMEM165Q9HC07 324 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 ARL8BQ9NVJ2 186 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 RPS6KA6Q9UK32 745 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 TMEM5Q9Y2B1 443 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 LRCH1Q9Y2L9 728 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 V9GYQ6 96 aa10.12□□□□□ -0.79
SOX2-OT-228ENST00000597828 WNK1Q9H4A3 2382 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 IGLV1-36A0A0B4J1U3 117 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 IGHV2-70DA0A0C4DH43 119 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 IQCF6A8MYZ5 107 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 B2RBV5 119 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 SURF4O15260 269 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 AHCYL1O43865 530 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 ATP5HO75947 161 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 RNASE1P07998 156 aaKnown RBP10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 MDKP21741 143 aaPredicted RBP10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 OMGP23515 440 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 HIST1H3AP68431 136 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 SLC9A3R2Q15599 337 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 RSPO1Q2MKA7 263 aaPredicted RBP10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 HIST2H3PS2Q5TEC6 136 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 SHISA2Q6UWI4 295 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 LYPD2Q6UXB3 125 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 BRD3OSQ6XYD6 125 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 CFAP77Q6ZQR2 320 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 HIST2H3AQ71DI3 136 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 MUC20Q8N307 709 aaPredicted RBP10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 OR52E2Q8NGJ4 325 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 OR52J3Q8NH60 311 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 SLC30A2Q9BRI3 323 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 ANKRD19PQ9H560 264 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 ADA2Q9NZK5 511 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 NDUFAF4Q9P032 175 aa10.11□□□□□ -0.79
SOX2-OT-228ENST00000597828 UNC119BA6NIH7 251 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 EBAG9O00559 213 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 PLATP00750 562 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 TUBG1P23258 451 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 KCNMB1Q16558 191 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 ZNF404Q494X3 552 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 PRAMEF6Q5VXH4 476 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 GPR139Q6DWJ6 353 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 LEG1Q6P5S2 330 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 ADCK1Q86TW2 530 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 NAA40Q86UY6 237 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 CYP4Z1Q86W10 505 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 OR13G1Q8NGZ3 307 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 FANK1Q8TC84 345 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 APOBEC3DQ96AK3 386 aaPredicted RBP10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 UPRTQ96BW1 309 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 NEIL1Q96FI4 390 aaPredicted RBP10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 COG8Q96MW5 612 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 ZNF582Q96NG8 517 aaPredicted RBP10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 ERMAPQ96PL5 475 aaPredicted RBP10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 NMNAT3Q96T66 252 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 COQ7Q99807 217 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 KCTD14Q9BQ13 255 aaPredicted RBP10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 CDADC1Q9BWV3 514 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 NDEL1Q9GZM8 345 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 HDHD2Q9H0R4 259 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 ZNF696Q9H7X3 374 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 TUBG2Q9NRH3 451 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 TNFRSF19Q9NS68 423 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 ABCD2Q9UBJ2 740 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 ATPIF1Q9UII2 106 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 AURKCQ9UQB9 309 aa10.1□□□□□ -0.79
SOX2-OT-228ENST00000597828 A0A1W2PRQ8 180 aa10.09□□□□□ -0.79
SOX2-OT-228ENST00000597828 J3QW42 95 aa10.09□□□□□ -0.79
SOX2-OT-228ENST00000597828 HOXA3O43365 443 aaPredicted RBP10.09□□□□□ -0.79
SOX2-OT-228ENST00000597828 FAM20BO75063 409 aa10.09□□□□□ -0.79
SOX2-OT-228ENST00000597828 TXNDC12O95881 172 aa10.09□□□□□ -0.79
SOX2-OT-228ENST00000597828 ACSM4P0C7M7 580 aa10.09□□□□□ -0.79
SOX2-OT-228ENST00000597828 FPR3P25089 353 aa10.09□□□□□ -0.79
SOX2-OT-228ENST00000597828 RPS27P42677 84 aaKnown RBP10.09□□□□□ -0.79
SOX2-OT-228ENST00000597828 SRP9P49458 86 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms