RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ADRA2AP08913 450 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 ACSM4P0C7M7 580 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 TUBG1P23258 451 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 MPV17P39210 176 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 ALDH3B1P43353 468 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 SLC15A1P46059 708 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 SLC6A9P48067 706 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 NUDT6P53370 316 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 MAD2L1BPQ15013 274 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 MOGQ16653 247 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 RSPO1Q2MKA7 263 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 KRTAP27-1Q3LI81 207 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 PRSS57Q6UWY2 283 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 KLF14Q8TD94 323 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 SNX33Q8WV41 574 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 TRUB1Q8WWH5 349 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 ZNF799Q96GE5 643 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 RDH12Q96NR8 316 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 CNN2Q99439 309 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 YIPF3Q9GZM5 350 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 RAB1BQ9H0U4 201 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 TUBG2Q9NRH3 451 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 SMPD3Q9NY59 655 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 DNAJC27Q9NZQ0 273 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 LAMP5Q9UJQ1 280 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 STARD10Q9Y365 291 aa16.86■□□□□ 0.29
SHKBP1-214ENST00000597396 LCATP04180 440 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 HSD11B1P28845 292 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 PRKXP51817 358 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 GRB2P62993 217 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 ALKBH6Q3KRA9 238 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 MBNL2Q5VZF2 373 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 ZNF771Q7L3S4 317 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 PACRGLQ8N7B6 248 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 ZNF283Q8N7M2 679 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 ZNF555Q8NEP9 628 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 SORCS2Q96PQ0 1159 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 KCNJ15Q99712 375 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 MS4A5Q9H3V2 200 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 POFUT1Q9H488 388 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 PTTG3PQ9NZH4 202 aa16.85■□□□□ 0.29
SHKBP1-214ENST00000597396 LOC100130705A0A1B0GUX0 176 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 SSX4O60224 188 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 IGHV3-13P01766 116 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 H2BFMP0C1H6 154 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 EFNA4P52798 201 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 GGTLC2Q14390 218 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 DRAM2Q6UX65 266 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 KRTAP1-3Q8IUG1 177 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 ZCCHC24Q8N2G6 241 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 WFDC11Q8NEX6 87 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 RNF133Q8WVZ7 376 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 RFKQ969G6 155 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 UBE2FQ969M7 185 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 ZNF582Q96NG8 517 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 AMELYQ99218 206 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 C1QTNF5Q9BXJ0 243 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 TPK1Q9H3S4 243 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 FAM118AQ9NWS6 357 aa16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 WARS2Q9UGM6 360 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-214ENST00000597396 E9PQ18 207 aa16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 CASQ2O14958 399 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 TIMM8AO60220 97 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 MT-ND5P03915 603 aa16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 HTR1FP30939 366 aa16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 OTX1P32242 354 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 HCCSP53701 268 aa16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 NAA40Q86UY6 237 aa16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 CMBLQ96DG6 245 aa16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 Q96MF0 132 aa16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 HAO2Q9NYQ3 351 aa16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 KLHDC2Q9Y2U9 406 aa16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 TMEM14AQ9Y6G1 99 aa16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 ITPR3Q14573 2671 aa16.83■□□□□ 0.28
SHKBP1-214ENST00000597396 ZFHX3Q15911 3703 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 PLSCR5A0PG75 271 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 APOC1P02654 83 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 NAT2P11245 290 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 CD99P14209 185 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 ALOX5APP20292 161 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 CX3CR1P49238 355 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 SNRPGP62308 76 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 SLC34A1Q06495 639 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 MALLQ13021 153 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 CLEC12BQ2HXU8 276 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 OGFRL1Q5TC84 451 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 COLCA1Q6ZS62 124 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 RHOUQ7L0Q8 258 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 KRT77Q7Z794 578 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 TGIF2LYQ8IUE0 185 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 SLC35F2Q8IXU6 374 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 OR51G2Q8NGK0 314 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 NEU4Q8WWR8 484 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 VCXQ9H320 206 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 ADGRL4Q9HBW9 690 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 NKX1-2Q9UD57 310 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 N6AMT1Q9Y5N5 214 aa16.82■□□□□ 0.28
SHKBP1-214ENST00000597396 SLC16A6O15403 523 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 MPZL2O60487 215 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms