RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 OR2AJ1Q8NGZ0 328 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 FAM222BQ8WU58 562 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 RNF133Q8WVZ7 376 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 SLAMF6Q96DU3 332 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 OR5M11Q96RB7 305 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 WACQ9BTA9 647 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 ALG8Q9BVK2 526 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 HDHD5Q9BXW7 423 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 WNT5BQ9H1J7 359 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 C1orf198Q9H425 327 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 ACOT13Q9NPJ3 140 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 SLC17A5Q9NRA2 495 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 ELOVL5Q9NYP7 299 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 MRM2Q9UI43 246 aaKnown RBP8.2□□□□□ -1.1
TRIM28-208ENST00000597172 CAB39Q9Y376 341 aaPredicted RBP8.2□□□□□ -1.1
TRIM28-208ENST00000597172 TIMM10BQ9Y5J6 103 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 TMEM14AQ9Y6G1 99 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 TENM1Q9UKZ4 2725 aa8.2□□□□□ -1.1
TRIM28-208ENST00000597172 ARPC4-TTLL3A0A0A6YYG9 625 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 A0A1W2PR80 420 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 METTL15A6NJ78 407 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 OR5H1A6NKK0 313 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 J3QLW9 94 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 PHYHO14832 338 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 SYNGR3O43761 229 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 SMPD2O60906 423 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 FARS2O95363 451 aaKnown RBP8.19□□□□□ -1.1
TRIM28-208ENST00000597172 ABHD16AO95870 558 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 LALBAP00709 142 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 TFAP2AP05549 437 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 LCKP06239 509 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 ZNF19P17023 458 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 JUNBP17275 347 aaPredicted RBP8.19□□□□□ -1.1
TRIM28-208ENST00000597172 MYL12AP19105 171 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 CCKARP32238 428 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 UGT2B10P36537 528 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 PEX19P40855 299 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 OPRL1P41146 370 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 PCBD1P61457 104 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 RAB1AP62820 205 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 EGR3Q06889 387 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 KRTAP1-1Q07627 177 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 TBCEQ15813 527 aaPredicted RBP8.19□□□□□ -1.1
TRIM28-208ENST00000597172 SLC25A35Q3KQZ1 300 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 FBXL19-AS1Q494R0 122 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 TP53I3Q53FA7 332 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 ELFN2Q5R3F8 820 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 OR7E24Q6IFN5 339 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 ZNF774Q6NX45 483 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 LRRN1Q6UXK5 716 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 SPATC1Q76KD6 591 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 EGFL6Q8IUX8 553 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 CCDC36Q8IYA8 594 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 ZNF679Q8IYX0 411 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 CPEB3Q8NE35 698 aaKnown RBP8.19□□□□□ -1.1
TRIM28-208ENST00000597172 OR52N1Q8NH53 320 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 OR52N5Q8NH56 324 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 AKR7LQ8NHP1 331 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 SNX33Q8WV41 574 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 SPRYD4Q8WW59 207 aaPredicted RBP8.19□□□□□ -1.1
TRIM28-208ENST00000597172 GATAD2BQ8WXI9 593 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 ASB17Q8WXJ9 295 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 OR8B4Q96RC9 309 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 MRPS26Q9BYN8 205 aaKnown RBP8.19□□□□□ -1.1
TRIM28-208ENST00000597172 OR2H1Q9GZK4 316 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 KCNN2Q9H2S1 579 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 ELOVL3Q9HB03 270 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 CENPMQ9NSP4 180 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 CHCHD3Q9NX63 227 aaKnown RBP8.19□□□□□ -1.1
TRIM28-208ENST00000597172 GALNT8Q9NY28 637 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 ERGIC3Q9Y282 383 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 POLR1DQ9Y2S0 133 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 SNX5Q9Y5X3 404 aa8.19□□□□□ -1.1
TRIM28-208ENST00000597172 OR6C6A6NF89 314 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 E9PI62 339 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 C16orf97H3BN30 126 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 SRSF10O75494 262 aaKnown RBP8.18□□□□□ -1.1
TRIM28-208ENST00000597172 SULT1C4O75897 302 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 INMTO95050 263 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 CD79AP11912 226 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 ARR3P36575 388 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 CAPZA2P47755 286 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 ASCL1P50553 236 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 SCRN3Q0VDG4 424 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 KRTAP27-1Q3LI81 207 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 CHRFAM7AQ494W8 412 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 SLC36A2Q495M3 483 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 PABPC1L2AQ5JQF8 200 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 UBE2UQ5VVX9 321 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 LIPNQ5VXI9 398 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 KCTD18Q6PI47 426 aaPredicted RBP8.18□□□□□ -1.1
TRIM28-208ENST00000597172 DEGS2Q6QHC5 323 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 TMPRSS11AQ6ZMR5 421 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 PLEKHG7Q6ZR37 379 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 RHOUQ7L0Q8 258 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 VASH1Q7L8A9 365 aaPredicted RBP8.18□□□□□ -1.1
TRIM28-208ENST00000597172 KCTD20Q7Z5Y7 419 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 DPPA2Q7Z7J5 298 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 NAA40Q86UY6 237 aa8.18□□□□□ -1.1
TRIM28-208ENST00000597172 MDP1Q86V88 176 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms