RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 PPP2R2BQ00005 443 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 MALLQ13021 153 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 PSG7Q13046 419 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 EIF2B1Q14232 305 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 LYPD4Q6UWN0 246 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 RHOUQ7L0Q8 258 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 DPY19L4Q7Z388 723 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 ZNF454Q8N9F8 522 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 RDH5Q92781 318 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 HAVCR1Q96D42 359 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 ZMYND19Q96E35 227 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 CIB1Q99828 191 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 COPS4Q9BT78 406 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 C1QTNF5Q9BXJ0 243 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 TOR3AQ9H497 397 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 SP140LQ9H930 580 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 TMEFF2Q9UIK5 374 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 ZDHHC8Q9ULC8 765 aa14.77□□□□□ -0.05
SHKBP1-212ENST00000596163 ZNF878C9JN71 531 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 M0R135 149 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 TPD52L2O43399 206 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 TLX2O43763 284 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 SELEP16581 610 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 KITLGP21583 273 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 RAD23AP54725 363 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 RSPO1Q2MKA7 263 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 DRAM2Q6UX65 266 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 CLEC9AQ6UXN8 241 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 FBXW12Q6X9E4 464 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 COLCA1Q6ZS62 124 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 TIGD4Q8IY51 512 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 ZNF799Q96GE5 643 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 KCNJ15Q99712 375 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 EGLN1Q9GZT9 426 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 RIBC2Q9H4K1 309 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 PTTG3PQ9NZH4 202 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 PURGQ9UJV8 347 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 CELSR1Q9NYQ6 3014 aa14.76□□□□□ -0.05
SHKBP1-212ENST00000596163 USF1P22415 310 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 TNFSF4P23510 183 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 GIFP27352 417 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 SLC6A9P48067 706 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 MMP15P51511 669 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 LOXL1Q08397 574 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 APOFQ13790 326 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 C12orf73Q69YU5 71 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 TCEANCQ8N8B7 351 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 OR10S1Q8NGN2 331 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 TMEM163Q8TC26 289 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 ST7LQ8TDW4 575 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 TEAD3Q99594 435 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 C9orf16Q9BUW7 83 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 ABHD6Q9BV23 337 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 GABARAPL3Q9BY60 117 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 USE1Q9NZ43 259 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 ARFGEF3Q5TH69 2177 aa14.75□□□□□ -0.05
SHKBP1-212ENST00000596163 SPRY3O43610 288 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 PRKYO43930 277 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 HPXP02790 462 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 LYNP07948 512 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 ADH4P08319 380 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 ACHEP22303 614 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 SLC2A5P22732 501 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 HSD11B1P28845 292 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 OTX1P32242 354 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 NR4A2P43354 598 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 MAGEB1P43366 347 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 ALDH3A2P51648 485 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 TMEM33P57088 247 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 CCL8P80075 99 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 GABPB1Q06547 395 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 NXNL2Q5VZ03 156 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 SLC16A9Q7RTY1 509 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 PQLC1Q8N2U9 271 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 ZNF283Q8N7M2 679 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 BBS1Q8NFJ9 593 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 OTOSQ8NHW6 89 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 THEM6Q8WUY1 208 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 RNF133Q8WVZ7 376 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 ZNF582Q96NG8 517 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 YIPF3Q9GZM5 350 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 POFUT1Q9H488 388 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 GSX1Q9H4S2 264 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 CHODLQ9H9P2 273 aa14.74□□□□□ -0.05
SHKBP1-212ENST00000596163 MED13LQ71F56 2210 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 RTTNQ86VV8 2226 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 SLC22A31A6NKX4 558 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 VWC2LB2RUY7 222 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 EI24O14681 340 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 SELENOFO60613 162 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 BAG2O95816 211 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 LY6G6DO95868 133 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 ALPLP05186 524 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 H2BFMP0C1H6 154 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 EPHA2P29317 976 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 PRKXP51817 358 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 CDC42P60953 191 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 EFNB1P98172 346 aa14.73□□□□□ -0.05
SHKBP1-212ENST00000596163 TSTQ16762 297 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms