RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 CA7P43166 264 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 GDI2P50395 445 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 PRKXP51817 358 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 UBE2NP61088 152 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 RPS25P62851 125 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 PSG4Q00888 419 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 GALK2Q01415 458 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 P2RY6Q15077 328 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 RAB35Q15286 201 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF829Q3KNS6 432 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 TBRG1Q3YBR2 411 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 FOXB2Q5VYV0 432 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 SP5Q6BEB4 398 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 DMKNQ6E0U4 476 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF774Q6NX45 483 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 FDX2Q6P4F2 183 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 SPNS3Q6ZMD2 512 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 GDPGP1Q6ZNW5 385 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 MS4A15Q8N5U1 240 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF433Q8N7K0 673 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF283Q8N7M2 679 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 OR2G2Q8NGZ5 317 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 OR1F12Q8NHA8 337 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 FGFBP3Q8TAT2 258 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 GHSRQ92847 366 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 SPTSSAQ969W0 71 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 ISOC1Q96CN7 298 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 ATF6BQ99941 703 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 BCL7BQ9BQE9 202 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 CHCHD6Q9BRQ6 235 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 TMED9Q9BVK6 235 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 RBM38Q9H0Z9 239 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 OR51E2Q9H255 320 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 PNRC2Q9NPJ4 139 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 NDUFB11Q9NX14 153 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 STUB1Q9UNE7 303 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 GTF2A1LQ9UNN4 478 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 SF3B6Q9Y3B4 125 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 LOC100506127A0A0U1RQW1 187 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 LOC110117498-PIK3R3F6TDL0 507 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF701M0R085 212 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 DVL2O14641 736 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 MSTNO14793 375 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 GPRIN2O60269 458 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 DOK2O60496 412 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 RAD51DO75771 328 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 LYZL6O75951 148 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 SERPINA3P01011 423 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 HLA-HP01893 362 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 HLA-DPB1P04440 258 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 MMP7P09237 267 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 CCR9P51686 369 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 LSM3P62310 102 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 RAB1AP62820 205 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 PLP2Q04941 152 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 GABRA6Q16445 453 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 HIKESHIQ53FT3 197 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 SFRP5Q5T4F7 317 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 CXorf67Q86X51 503 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 ZGRF1Q86YA3 2104 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 GABRG1Q8N1C3 465 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF676Q8N7Q3 588 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 C1orf162Q8NEQ5 155 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 OR5AK2Q8NH90 309 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 AKR7LQ8NHP1 331 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 ABHD4Q8TB40 342 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 SMIM19Q96E16 107 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 DMRTA2Q96SC8 542 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 COQ7Q99807 217 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 COMMD4Q9H0A8 199 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 HDHD2Q9H0R4 259 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 WNT5BQ9H1J7 359 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 BRD7Q9NPI1 651 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 DDX28Q9NUL7 540 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 FRRS1LQ9P0K9 344 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 OR52A1Q9UKL2 312 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 FBXL3Q9UKT7 428 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 GSTK1Q9Y2Q3 226 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 N6AMT1Q9Y5N5 214 aa11.4□□□□□ -0.58
SHKBP1-209ENST00000595803 IQCMA0A1B0GVH7 501 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 TRDV1A0A1B0GX56 115 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 A8MXE2 369 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 F5H5K5 113 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 GPX5O75715 221 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 GABARAPO95166 117 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 PNPP00491 289 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 BMP5P22003 454 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 HOXC12P31275 282 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 CRYBB2P43320 205 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 HTR5AP47898 357 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 CX3CR1P49238 355 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 MMP16P51512 607 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 TPTEP56180 551 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 NANOS3P60323 173 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 FREM1Q5H8C1 2179 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 PABPC1L2AQ5JQF8 200 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 ZNF474Q6S9Z5 364 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 BHLHA15Q7RTS1 189 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 LUZP2Q86TE4 346 aa11.39□□□□□ -0.59
SHKBP1-209ENST00000595803 CATSPERDQ86XM0 798 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms