RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 RSRC1Q96IZ7 334 aaKnown RBP18.96■□□□□ 0.63
SSBP4-203ENST00000593641 HOPXQ9BPY8 73 aaPredicted RBP18.96■□□□□ 0.63
SSBP4-203ENST00000593641 SLC30A2Q9BRI3 323 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 AURKCQ9UQB9 309 aa18.96■□□□□ 0.63
SSBP4-203ENST00000593641 IGHV3-64DA0A0J9YX35 117 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 A0A1W2PRQ8 180 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 F5H5P2 479 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 H0YL77 283 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 NME4O00746 187 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 GPANK1O95872 356 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 SELEP16581 610 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 DGCR6Q14129 220 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 ZNF404Q494X3 552 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 DPY19L2P2Q6ZN68 376 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 JAZF1Q86VZ6 243 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 TMEM246Q9BRR3 403 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 HCAR1Q9BXC0 346 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 TMEM100Q9NV29 134 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 RPS6KA6Q9UK32 745 aa18.95■□□□□ 0.62
SSBP4-203ENST00000593641 MLNRO43193 412 aa18.94■□□□□ 0.62
SSBP4-203ENST00000593641 FSTL3O95633 263 aa18.94■□□□□ 0.62
SSBP4-203ENST00000593641 PLATP00750 562 aa18.94■□□□□ 0.62
SSBP4-203ENST00000593641 OMPP47874 163 aa18.94■□□□□ 0.62
SSBP4-203ENST00000593641 PITPNBP48739 271 aa18.94■□□□□ 0.62
SSBP4-203ENST00000593641 GSK3BP49841 420 aa18.94■□□□□ 0.62
SSBP4-203ENST00000593641 TREML4Q6UXN2 200 aa18.94■□□□□ 0.62
SSBP4-203ENST00000593641 SPATC1Q76KD6 591 aa18.94■□□□□ 0.62
SSBP4-203ENST00000593641 WDR76Q9H967 626 aa18.94■□□□□ 0.62
SSBP4-203ENST00000593641 CLN8Q9UBY8 286 aa18.94■□□□□ 0.62
SSBP4-203ENST00000593641 LHFPL6Q9Y693 200 aa18.94■□□□□ 0.62
SSBP4-203ENST00000593641 NDUFAB1O14561 156 aa18.93■□□□□ 0.62
SSBP4-203ENST00000593641 TXNDC12O95881 172 aa18.93■□□□□ 0.62
SSBP4-203ENST00000593641 FPR3P25089 353 aa18.93■□□□□ 0.62
SSBP4-203ENST00000593641 CDKN2AP42771 156 aaKnown RBP18.93■□□□□ 0.62
SSBP4-203ENST00000593641 MEP1BQ16820 701 aa18.93■□□□□ 0.62
SSBP4-203ENST00000593641 CORO6Q6QEF8 472 aa18.93■□□□□ 0.62
SSBP4-203ENST00000593641 TSSK2Q96PF2 358 aa18.93■□□□□ 0.62
SSBP4-203ENST00000593641 KCTD14Q9BQ13 255 aaPredicted RBP18.93■□□□□ 0.62
SSBP4-203ENST00000593641 NUDT16L1Q9BRJ7 211 aaKnown RBP18.93■□□□□ 0.62
SSBP4-203ENST00000593641 UNC119BA6NIH7 251 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 HLA-DPB1P04440 258 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 COX4I1P13073 169 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 NCK1P16333 377 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 RHCEP18577 417 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 HIST1H3AP68431 136 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 COX10Q12887 443 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 FAM201AQ5SY85 155 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 HIST2H3PS2Q5TEC6 136 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 C16orf87Q6PH81 154 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 SMARCD3Q6STE5 483 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 HIST2H3AQ71DI3 136 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 TSEN54Q7Z6J9 526 aaKnown RBP18.92■□□□□ 0.62
SSBP4-203ENST00000593641 OR11L1Q8NGX0 322 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 ZDHHC16Q969W1 377 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 DACT3Q96B18 629 aaPredicted RBP18.92■□□□□ 0.62
SSBP4-203ENST00000593641 SLITRK2Q9H156 845 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 EFCAB1Q9HAE3 211 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 NDUFAF4Q9P032 175 aa18.92■□□□□ 0.62
SSBP4-203ENST00000593641 SOX21Q9Y651 276 aaPredicted RBP18.92■□□□□ 0.62
SSBP4-203ENST00000593641 KIR2DS1A0A191URI9 304 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 PHYHO14832 338 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 SASH3O75995 380 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 PPP1R3DO95685 299 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 H2AFXP16104 143 aaPredicted RBP18.91■□□□□ 0.62
SSBP4-203ENST00000593641 GATA4P43694 442 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 FXYD6P3P58550 94 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 MALLQ13021 153 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 KRT72Q14CN4 511 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 DCDC5Q6ZRR9 648 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 CELF2-AS1Q8N7Q2 184 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 OR10S1Q8NGN2 331 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 FANK1Q8TC84 345 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 ERGIC1Q969X5 290 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 TMIGD2Q96BF3 282 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 ERMAPQ96PL5 475 aaPredicted RBP18.91■□□□□ 0.62
SSBP4-203ENST00000593641 PITX2Q99697 317 aa18.91■□□□□ 0.62
SSBP4-203ENST00000593641 WNK1Q9H4A3 2382 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 IGLV1-36A0A0B4J1U3 117 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 TRBV4-1A0A0J9YWV2 114 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 MDFIC2A0A1B0GVS7 189 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 F5H5K5 113 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 DCTN6O00399 190 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 RENP00797 406 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 MDKP21741 143 aaPredicted RBP18.9■□□□□ 0.62
SSBP4-203ENST00000593641 NUDT2P50583 147 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 GPR157Q5UAW9 335 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 BRD3OSQ6XYD6 125 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 COLCA1Q6ZS62 124 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 FITM2Q8N6M3 262 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 TAF15Q92804 592 aaKnown RBP eCLIP18.9■□□□□ 0.62
SSBP4-203ENST00000593641 ATF6BQ99941 703 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 CDADC1Q9BWV3 514 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 SRA1Q9HD15 236 aaKnown RBP18.9■□□□□ 0.62
SSBP4-203ENST00000593641 B9D1Q9UPM9 204 aa18.9■□□□□ 0.62
SSBP4-203ENST00000593641 SAMD4AQ9UPU9 718 aaKnown RBP18.9■□□□□ 0.62
SSBP4-203ENST00000593641 HOXA3O43365 443 aaPredicted RBP18.89■□□□□ 0.61
SSBP4-203ENST00000593641 ACSM4P0C7M7 580 aa18.89■□□□□ 0.61
SSBP4-203ENST00000593641 MDH1P40925 334 aaKnown RBP18.89■□□□□ 0.61
SSBP4-203ENST00000593641 PMELP40967 661 aa18.89■□□□□ 0.61
SSBP4-203ENST00000593641 PRSS12P56730 875 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms