RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TUSC1Q2TAM9 212 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 LEG1Q6P5S2 330 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 MOGAT3Q86VF5 341 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 FANK1Q8TC84 345 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 C7orf34Q96L11 122 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 ZNF48Q96MX3 618 aaPredicted RBP17.16■□□□□ 0.34
TRIM47-207ENST00000593089 MS4A7Q9GZW8 240 aaPredicted RBP17.16■□□□□ 0.34
TRIM47-207ENST00000593089 TMEM165Q9HC07 324 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 ZNF446Q9NWS9 450 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 SAMD4AQ9UPU9 718 aaKnown RBP17.16■□□□□ 0.34
TRIM47-207ENST00000593089 V9GYQ6 96 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 IGLV1-36A0A0B4J1U3 117 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 IQCF6A8MYZ5 107 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 MLNRO43193 412 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 WIPF1O43516 503 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 CD80P33681 288 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 PAX8Q06710 450 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 PGM2L1Q6PCE3 622 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 JAZF1Q86VZ6 243 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 KLBQ86Z14 1044 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 LINC00346Q8IVM7 164 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 RNF148Q8N7C7 305 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 OR52E2Q8NGJ4 325 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 C1orf147Q96MC9 270 aaPredicted RBP17.15■□□□□ 0.34
TRIM47-207ENST00000593089 NMNAT3Q96T66 252 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 SLC30A2Q9BRI3 323 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 DCAF13Q9NV06 445 aaKnown RBP17.15■□□□□ 0.34
TRIM47-207ENST00000593089 B9D1Q9UPM9 204 aa17.15■□□□□ 0.34
TRIM47-207ENST00000593089 RENP00797 406 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 HLA-DPB1P04440 258 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 IGHV4-38-2P0DP08 117 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 SELEP16581 610 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 MDH1P40925 334 aaKnown RBP17.14■□□□□ 0.33
TRIM47-207ENST00000593089 GNB2P62879 340 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 COX10Q12887 443 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 FAM201AQ5SY85 155 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 BTNL3Q6UXE8 466 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 OR6V1Q8N148 313 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 PARP8Q8N3A8 854 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 DHRS1Q96LJ7 313 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 TMEM246Q9BRR3 403 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 FUZQ9BT04 418 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 ZNF747Q9BV97 191 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 OR52D1Q9H346 318 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 ZMAT3Q9HA38 289 aaKnown RBP17.14■□□□□ 0.33
TRIM47-207ENST00000593089 SPAG4Q9NPE6 437 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 ADA2Q9NZK5 511 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 MIOXQ9UGB7 285 aa17.14■□□□□ 0.33
TRIM47-207ENST00000593089 LRRC30A6NM36 301 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 GMNNO75496 209 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 FPR3P25089 353 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 SLC6A6P31641 620 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 PAX2Q02962 417 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 RSPO1Q2MKA7 263 aaPredicted RBP17.13■□□□□ 0.33
TRIM47-207ENST00000593089 RFX4Q33E94 735 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 LRRN1Q6UXK5 716 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 CFAP77Q6ZQR2 320 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 SLC26A10Q8NG04 563 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 OR4K13Q8NH42 304 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 NEIL1Q96FI4 390 aaPredicted RBP17.13■□□□□ 0.33
TRIM47-207ENST00000593089 HCAR1Q9BXC0 346 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 RPRD1BQ9NQG5 326 aaKnown RBP17.13■□□□□ 0.33
TRIM47-207ENST00000593089 TMEM100Q9NV29 134 aa17.13■□□□□ 0.33
TRIM47-207ENST00000593089 SOX21Q9Y651 276 aaPredicted RBP17.13■□□□□ 0.33
TRIM47-207ENST00000593089 IGHV2-70DA0A0C4DH43 119 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 F5H5K5 113 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 GADD45GO95257 159 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 HIST1H1CP16403 213 aaKnown RBP17.12■□□□□ 0.33
TRIM47-207ENST00000593089 PMELP40967 661 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 SPIBQ01892 262 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 ZNF181Q2M3W8 571 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 ZNF404Q494X3 552 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 HSP90B2PQ58FF3 399 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 SLC18B1Q6NT16 456 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 SHISA2Q6UWI4 295 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 C1orf87Q8N0U7 546 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 OR8B3Q8NGG8 313 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 RAB40AQ8WXH6 277 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 CMTM5Q96DZ9 223 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 PLEKHA8Q96JA3 519 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 OR8B2Q96RD0 313 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 PITX2Q99697 317 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 IFT27Q9BW83 186 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 CDADC1Q9BWV3 514 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 FN3KQ9H479 309 aa17.12■□□□□ 0.33
TRIM47-207ENST00000593089 DOCK11Q5JSL3 2073 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 TRAV40A0A0B4J280 105 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 TMPRSS2O15393 492 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 HLA-DQA2P01906 255 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 RNASE1P07998 156 aaKnown RBP17.11■□□□□ 0.33
TRIM47-207ENST00000593089 ACSM4P0C7M7 580 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 CPT2P23786 658 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 GK2Q14410 553 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-207ENST00000593089 KRTAP27-1Q3LI81 207 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 SLC36A3Q495N2 470 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 COLCA1Q6ZS62 124 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 NAA40Q86UY6 237 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 OR2AJ1Q8NGZ0 328 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 SLC25A28Q96A46 364 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 SLCO4A1Q96BD0 722 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms