RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 C10orf53Q8N6V4 93 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 KREMEN2Q8NCW0 462 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 SLC41A2Q96JW4 573 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 LYSMD1Q96S90 227 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 CERS4Q9HA82 394 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 BCO1Q9HAY6 547 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 HSF4Q9ULV5 492 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 SNRNP200O75643 2136 aaKnown RBP13.64□□□□□ -0.23
CIRBP-228ENST00000590347 ZNF860A6NHJ4 632 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 MBPP02686 304 aaPredicted RBP13.64□□□□□ -0.23
CIRBP-228ENST00000590347 PPP1CCP36873 323 aaKnown RBP13.64□□□□□ -0.23
CIRBP-228ENST00000590347 TRAPPC6BQ86SZ2 158 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 TCEAL8Q8IYN2 117 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 PRSS35Q8N3Z0 413 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 ACOT4Q8N9L9 421 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 DCBLD2Q96PD2 775 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 S100A13Q99584 98 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 ALG12Q9BV10 488 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 WDR76Q9H967 626 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 LSM7Q9UK45 103 aaKnown RBP13.64□□□□□ -0.23
CIRBP-228ENST00000590347 CBY1Q9Y3M2 126 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 EML5Q05BV3 1969 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 SEC14L6B5MCN3 397 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 H0YL77 283 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 EFSO43281 561 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 F13BP05160 661 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 SLC35G4P0C7Q5 338 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 CTSAP10619 480 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 MYOGP15173 224 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 SLC6A6P31641 620 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 RGS19P49795 217 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 ZNHIT3Q15649 155 aaPredicted RBP13.64□□□□□ -0.23
CIRBP-228ENST00000590347 GGNBP1Q5YKI7 109 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 SLC25A42Q86VD7 318 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 FJX1Q86VR8 437 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 WDR34Q96EX3 536 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 ZDHHC5Q9C0B5 715 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 NELFAQ9H3P2 528 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 RXFP3Q9NSD7 469 aa13.64□□□□□ -0.23
CIRBP-228ENST00000590347 TRGC1P0CF51 173 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 GLI4P10075 376 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 DIO1P49895 249 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 TRA2AQ13595 282 aaKnown RBP eCLIP13.63□□□□□ -0.23
CIRBP-228ENST00000590347 BATFQ16520 125 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 CLEC12BQ2HXU8 276 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 LPCAT3Q6P1A2 487 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 DNM1P46Q6ZS02 220 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 LANCL3Q6ZV70 420 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 OR56A1Q8NGH5 318 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 OR1J1Q8NGS3 322 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 OR10J5Q8NHC4 309 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 FRZBQ92765 325 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 DTD2Q96FN9 168 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 DDA1Q9BW61 102 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 SNHG12Q9BXW3 62 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 RAB22AQ9UL26 194 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 TP53TG5Q9Y2B4 290 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 ELFN1P0C7U0 828 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 INSM1Q01101 510 aaPredicted RBP13.63□□□□□ -0.23
CIRBP-228ENST00000590347 PMPCAQ10713 525 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 NNATQ16517 81 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 ASTLQ6HA08 431 aaPredicted RBP13.63□□□□□ -0.23
CIRBP-228ENST00000590347 MDGA2Q7Z553 956 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 KLHDC8AQ8IYD2 350 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 HSD17B11Q8NBQ5 300 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 VN1R2Q8NFZ6 395 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 HPSE2Q8WWQ2 592 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 SH3BGRL3Q9H299 93 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 FBXL17Q9UF56 701 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 MRPS18BQ9Y676 258 aaKnown RBP13.63□□□□□ -0.23
CIRBP-228ENST00000590347 COLEC10Q9Y6Z7 277 aa13.63□□□□□ -0.23
CIRBP-228ENST00000590347 A0A1B0GWA3 101 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 SMCO3A2RU48 225 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 MARCH11A6NNE9 402 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 UPK3AO75631 287 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 GDI1P31150 447 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 TAGLN2P37802 199 aaKnown RBP13.62□□□□□ -0.23
CIRBP-228ENST00000590347 SLC26A5P58743 744 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 NHLH2Q02577 135 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 THNSL2Q86YJ6 484 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 ZNF547Q8IVP9 402 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 SLC17A9Q9BYT1 436 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 SLC5A7Q9GZV3 580 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 VSX1Q9NZR4 365 aaPredicted RBP13.62□□□□□ -0.23
CIRBP-228ENST00000590347 LSM5Q9Y4Y9 91 aaKnown RBP13.62□□□□□ -0.23
CIRBP-228ENST00000590347 WNT6Q9Y6F9 365 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 LMX1BO60663 402 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 IFNA6P05013 189 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 PGA4P0DJD7 388 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 PGA5P0DJD9 388 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 CPMP14384 443 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 GNB3P16520 340 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 CAMLGP49069 296 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 MESTQ5EB52 335 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 SLC39A7Q92504 469 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 FAM83CQ9BQN1 747 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 TEX101Q9BY14 249 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 A0A0A6YYD5 115 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 LOC100289279A0A1B0GTE1 492 aa13.62□□□□□ -0.23
CIRBP-228ENST00000590347 A8MWP6 167 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms