RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 M0R135 149 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 NDUFS7O75251 213 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 LYNP07948 512 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 ADRA2AP08913 450 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 MRPL3P09001 348 aaKnown RBP18.27■□□□□ 0.52
ATG4D-212ENST00000590096 ACSM4P0C7M7 580 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 PEX2P28328 305 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 SLC6A9P48067 706 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 GRB2P62993 217 aaKnown RBP18.27■□□□□ 0.52
ATG4D-212ENST00000590096 MBNL2Q5VZF2 373 aaKnown RBP18.27■□□□□ 0.52
ATG4D-212ENST00000590096 SPNS3Q6ZMD2 512 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 SPATC1Q76KD6 591 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 PACRGLQ8N7B6 248 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 KLF14Q8TD94 323 aaPredicted RBP18.27■□□□□ 0.52
ATG4D-212ENST00000590096 THEM6Q8WUY1 208 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 SNX33Q8WV41 574 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 ZNF799Q96GE5 643 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 CNN2Q99439 309 aaKnown RBP18.27■□□□□ 0.52
ATG4D-212ENST00000590096 YIPF3Q9GZM5 350 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 MS4A5Q9H3V2 200 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 LAMP5Q9UJQ1 280 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 STARD10Q9Y365 291 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 IGHV3-13P01766 116 aa18.26■□□□□ 0.51
ATG4D-212ENST00000590096 HSD11B1P28845 292 aa18.26■□□□□ 0.51
ATG4D-212ENST00000590096 MPV17P39210 176 aa18.26■□□□□ 0.51
ATG4D-212ENST00000590096 ALDH3B1P43353 468 aa18.26■□□□□ 0.51
ATG4D-212ENST00000590096 GGTLC2Q14390 218 aa18.26■□□□□ 0.51
ATG4D-212ENST00000590096 MAD2L1BPQ15013 274 aaPredicted RBP18.26■□□□□ 0.51
ATG4D-212ENST00000590096 RSPO1Q2MKA7 263 aaPredicted RBP18.26■□□□□ 0.51
ATG4D-212ENST00000590096 ZNF555Q8NEP9 628 aa18.26■□□□□ 0.51
ATG4D-212ENST00000590096 RNF133Q8WVZ7 376 aa18.26■□□□□ 0.51
ATG4D-212ENST00000590096 RFKQ969G6 155 aa18.26■□□□□ 0.51
ATG4D-212ENST00000590096 KCNJ15Q99712 375 aa18.26■□□□□ 0.51
ATG4D-212ENST00000590096 DNAJC27Q9NZQ0 273 aa18.26■□□□□ 0.51
ATG4D-212ENST00000590096 LOC100130705A0A1B0GUX0 176 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 E9PQ18 207 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 MT-ND5P03915 603 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 LCATP04180 440 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 EFNA4P52798 201 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 ALKBH6Q3KRA9 238 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 DRAM2Q6UX65 266 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 RHOUQ7L0Q8 258 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.25■□□□□ 0.51
ATG4D-212ENST00000590096 KRTAP1-3Q8IUG1 177 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 ZNF283Q8N7M2 679 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 WFDC11Q8NEX6 87 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 ZNF582Q96NG8 517 aaPredicted RBP18.25■□□□□ 0.51
ATG4D-212ENST00000590096 SORCS2Q96PQ0 1159 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 C1QTNF5Q9BXJ0 243 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 POFUT1Q9H488 388 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 FAM118AQ9NWS6 357 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 HAO2Q9NYQ3 351 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 WARS2Q9UGM6 360 aaKnown RBP18.25■□□□□ 0.51
ATG4D-212ENST00000590096 TMEM14AQ9Y6G1 99 aa18.25■□□□□ 0.51
ATG4D-212ENST00000590096 CASQ2O14958 399 aaPredicted RBP18.24■□□□□ 0.51
ATG4D-212ENST00000590096 SSX4O60224 188 aa18.24■□□□□ 0.51
ATG4D-212ENST00000590096 APOC1P02654 83 aa18.24■□□□□ 0.51
ATG4D-212ENST00000590096 H2BFMP0C1H6 154 aa18.24■□□□□ 0.51
ATG4D-212ENST00000590096 HTR1FP30939 366 aa18.24■□□□□ 0.51
ATG4D-212ENST00000590096 OTX1P32242 354 aaPredicted RBP18.24■□□□□ 0.51
ATG4D-212ENST00000590096 PRKXP51817 358 aa18.24■□□□□ 0.51
ATG4D-212ENST00000590096 MALLQ13021 153 aa18.24■□□□□ 0.51
ATG4D-212ENST00000590096 COLCA1Q6ZS62 124 aa18.24■□□□□ 0.51
ATG4D-212ENST00000590096 ZNF771Q7L3S4 317 aaPredicted RBP18.24■□□□□ 0.51
ATG4D-212ENST00000590096 ZCCHC24Q8N2G6 241 aaKnown RBP18.24■□□□□ 0.51
ATG4D-212ENST00000590096 AMELYQ99218 206 aa18.24■□□□□ 0.51
ATG4D-212ENST00000590096 VCXQ9H320 206 aa18.24■□□□□ 0.51
ATG4D-212ENST00000590096 TPK1Q9H3S4 243 aa18.24■□□□□ 0.51
ATG4D-212ENST00000590096 PTTG3PQ9NZH4 202 aa18.24■□□□□ 0.51
ATG4D-212ENST00000590096 PLSCR5A0PG75 271 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 TIMM8AO60220 97 aaPredicted RBP18.23■□□□□ 0.51
ATG4D-212ENST00000590096 MPZL2O60487 215 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 F12P00748 615 aaPredicted RBP18.23■□□□□ 0.51
ATG4D-212ENST00000590096 OPRL1P41146 370 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 HCCSP53701 268 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 SNRPGP62308 76 aaKnown RBP18.23■□□□□ 0.51
ATG4D-212ENST00000590096 SLC34A1Q06495 639 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 POU4F2Q12837 409 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 TMED1Q13445 227 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 CLEC12BQ2HXU8 276 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 OGFRL1Q5TC84 451 aaPredicted RBP18.23■□□□□ 0.51
ATG4D-212ENST00000590096 MEDAGQ5VYS4 303 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 KCTD18Q6PI47 426 aaPredicted RBP18.23■□□□□ 0.51
ATG4D-212ENST00000590096 NAA40Q86UY6 237 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 TGIF2LYQ8IUE0 185 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 OR51G2Q8NGK0 314 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 NEU4Q8WWR8 484 aaPredicted RBP18.23■□□□□ 0.51
ATG4D-212ENST00000590096 UBE2FQ969M7 185 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 CMBLQ96DG6 245 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 Q96MF0 132 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 MNTQ99583 582 aa18.23■□□□□ 0.51
ATG4D-212ENST00000590096 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.23■□□□□ 0.51
ATG4D-212ENST00000590096 SNTNA6NMZ2 147 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 SLC16A6O15403 523 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 NAT2P11245 290 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 ALOX5APP20292 161 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 ATP6V1E1P36543 226 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 CX3CR1P49238 355 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 PSG7Q13046 419 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 FBXW12Q6X9E4 464 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms