RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 OR1J4Q8NGS1 313 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 OR2AJ1Q8NGZ0 328 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 OR52I2Q8NH67 350 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 CAPSLQ8WWF8 208 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 EXTL1Q92935 676 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 PNPLA2Q96AD5 504 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 PHF21AQ96BD5 680 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 FAM3DQ96BQ1 224 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 RNF170Q96K19 258 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 DMRTB1Q96MA1 342 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 MED28Q9H204 178 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 CDCP1Q9H5V8 836 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 TMEM185BQ9H7F4 350 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 DIABLOQ9NR28 239 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 MCUBQ9NWR8 336 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 FAM206AQ9NX38 181 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 TAS2R4Q9NYW5 299 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 STMN3Q9NZ72 180 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 PTTG3PQ9NZH4 202 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 PADI1Q9ULC6 663 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 RCE1Q9Y256 329 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 BOD1L1Q8NFC6 3051 aa8.84□□□□□ -0.99
VPS25-202ENST00000589219 TENM4Q6N022 2769 aa8.83□□□□□ -1
VPS25-202ENST00000589219 LOC390937A0A1W2PQ73 354 aa8.83□□□□□ -1
VPS25-202ENST00000589219 GGT3PA6NGU5 568 aa8.83□□□□□ -1
VPS25-202ENST00000589219 SULT1C2O00338 296 aa8.83□□□□□ -1
VPS25-202ENST00000589219 CTAG2O75638 210 aa8.83□□□□□ -1
VPS25-202ENST00000589219 CBR3O75828 277 aa8.83□□□□□ -1
VPS25-202ENST00000589219 MT-ND4P03905 459 aa8.83□□□□□ -1
VPS25-202ENST00000589219 CSF1P09603 554 aa8.83□□□□□ -1
VPS25-202ENST00000589219 GIFP27352 417 aa8.83□□□□□ -1
VPS25-202ENST00000589219 SRD5A2P31213 254 aa8.83□□□□□ -1
VPS25-202ENST00000589219 ZNF133P52736 654 aaPredicted RBP8.83□□□□□ -1
VPS25-202ENST00000589219 GRB2P62993 217 aaKnown RBP8.83□□□□□ -1
VPS25-202ENST00000589219 CDK10Q15131 360 aa8.83□□□□□ -1
VPS25-202ENST00000589219 INPP5JQ15735 1006 aaPredicted RBP8.83□□□□□ -1
VPS25-202ENST00000589219 HIST3H3Q16695 136 aa8.83□□□□□ -1
VPS25-202ENST00000589219 LINC00303Q3SY05 128 aa8.83□□□□□ -1
VPS25-202ENST00000589219 C10orf128Q5T292 105 aa8.83□□□□□ -1
VPS25-202ENST00000589219 OTPQ5XKR4 325 aa8.83□□□□□ -1
VPS25-202ENST00000589219 FOXL2NBQ6ZUU3 175 aa8.83□□□□□ -1
VPS25-202ENST00000589219 PRSS45Q7RTY3 260 aa8.83□□□□□ -1
VPS25-202ENST00000589219 MDGA2Q7Z553 956 aa8.83□□□□□ -1
VPS25-202ENST00000589219 GPAT4Q86UL3 456 aa8.83□□□□□ -1
VPS25-202ENST00000589219 WDFY1Q8IWB7 410 aa8.83□□□□□ -1
VPS25-202ENST00000589219 ELMOD2Q8IZ81 293 aa8.83□□□□□ -1
VPS25-202ENST00000589219 CT55Q8WUE5 264 aa8.83□□□□□ -1
VPS25-202ENST00000589219 NKD1Q969G9 470 aa8.83□□□□□ -1
VPS25-202ENST00000589219 RELTQ969Z4 430 aa8.83□□□□□ -1
VPS25-202ENST00000589219 PTX4Q96A99 478 aa8.83□□□□□ -1
VPS25-202ENST00000589219 PIGQQ9BRB3 760 aa8.83□□□□□ -1
VPS25-202ENST00000589219 EMC6Q9BV81 110 aa8.83□□□□□ -1
VPS25-202ENST00000589219 C20orf85Q9H1P6 137 aa8.83□□□□□ -1
VPS25-202ENST00000589219 GHITMQ9H3K2 345 aa8.83□□□□□ -1
VPS25-202ENST00000589219 SLA2Q9H6Q3 261 aa8.83□□□□□ -1
VPS25-202ENST00000589219 HRASLSQ9HDD0 168 aa8.83□□□□□ -1
VPS25-202ENST00000589219 EMC7Q9NPA0 242 aa8.83□□□□□ -1
VPS25-202ENST00000589219 CENPMQ9NSP4 180 aa8.83□□□□□ -1
VPS25-202ENST00000589219 GDF2Q9UK05 429 aaPredicted RBP8.83□□□□□ -1
VPS25-202ENST00000589219 FBXL3Q9UKT7 428 aa8.83□□□□□ -1
VPS25-202ENST00000589219 TCFL5Q9UL49 500 aa8.83□□□□□ -1
VPS25-202ENST00000589219 ASH1LQ9NR48 2969 aaKnown RBP8.83□□□□□ -1
VPS25-202ENST00000589219 SETXQ7Z333 2677 aaKnown RBP8.82□□□□□ -1
VPS25-202ENST00000589219 TRAV6A0A075B6T7 132 aa8.82□□□□□ -1
VPS25-202ENST00000589219 A0A0A6YYJ9 748 aa8.82□□□□□ -1
VPS25-202ENST00000589219 TMEM272A0A1B0GTI8 110 aa8.82□□□□□ -1
VPS25-202ENST00000589219 A0A1B0GUH1 482 aa8.82□□□□□ -1
VPS25-202ENST00000589219 A0A1B0GVI7 797 aa8.82□□□□□ -1
VPS25-202ENST00000589219 OR2M5A3KFT3 312 aa8.82□□□□□ -1
VPS25-202ENST00000589219 PEX14O75381 377 aa8.82□□□□□ -1
VPS25-202ENST00000589219 SCGNO76038 276 aa8.82□□□□□ -1
VPS25-202ENST00000589219 P04436 131 aa8.82□□□□□ -1
VPS25-202ENST00000589219 SERPINA7P05543 415 aa8.82□□□□□ -1
VPS25-202ENST00000589219 ERCC1P07992 297 aaPredicted RBP8.82□□□□□ -1
VPS25-202ENST00000589219 ITGA5P08648 1049 aa8.82□□□□□ -1
VPS25-202ENST00000589219 ACSM4P0C7M7 580 aa8.82□□□□□ -1
VPS25-202ENST00000589219 FAM87AP0C7U9 286 aa8.82□□□□□ -1
VPS25-202ENST00000589219 ANXA3P12429 323 aa8.82□□□□□ -1
VPS25-202ENST00000589219 GABRA1P14867 456 aa8.82□□□□□ -1
VPS25-202ENST00000589219 RAB6AP20340 208 aa8.82□□□□□ -1
VPS25-202ENST00000589219 TCEA1P23193 301 aaKnown RBP8.82□□□□□ -1
VPS25-202ENST00000589219 HTR2CP28335 458 aa8.82□□□□□ -1
VPS25-202ENST00000589219 HSD11B1P28845 292 aa8.82□□□□□ -1
VPS25-202ENST00000589219 OTX2P32243 289 aa8.82□□□□□ -1
VPS25-202ENST00000589219 CSNK1A1P48729 337 aa8.82□□□□□ -1
VPS25-202ENST00000589219 GZMKP49863 264 aa8.82□□□□□ -1
VPS25-202ENST00000589219 ACTBP60709 375 aa8.82□□□□□ -1
VPS25-202ENST00000589219 LSM6P62312 80 aaKnown RBP8.82□□□□□ -1
VPS25-202ENST00000589219 RAC1P63000 192 aa8.82□□□□□ -1
VPS25-202ENST00000589219 ACTG1P63261 375 aa8.82□□□□□ -1
VPS25-202ENST00000589219 H3F3AP84243 136 aa8.82□□□□□ -1
VPS25-202ENST00000589219 SRSF6Q13247 344 aaKnown RBP8.82□□□□□ -1
VPS25-202ENST00000589219 CAMK2DQ13557 499 aa8.82□□□□□ -1
VPS25-202ENST00000589219 SSPNQ14714 243 aa8.82□□□□□ -1
VPS25-202ENST00000589219 BCL2A1Q16548 175 aa8.82□□□□□ -1
VPS25-202ENST00000589219 TBR1Q16650 682 aa8.82□□□□□ -1
VPS25-202ENST00000589219 C1orf100Q5SVJ3 147 aa8.82□□□□□ -1
VPS25-202ENST00000589219 ASPHD2Q6ICH7 369 aa8.82□□□□□ -1
VPS25-202ENST00000589219 LRFN4Q6PJG9 635 aa8.82□□□□□ -1
VPS25-202ENST00000589219 SERPINA12Q8IW75 414 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms