RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 MAGEB1P43366 347 aa13.19□□□□□ -0.3
GCDH-208ENST00000588905 PCK2Q16822 640 aa13.19□□□□□ -0.3
GCDH-208ENST00000588905 TEX30Q5JUR7 227 aa13.19□□□□□ -0.3
GCDH-208ENST00000588905 KDM4DQ6B0I6 523 aa13.19□□□□□ -0.3
GCDH-208ENST00000588905 PLBD1Q6P4A8 553 aa13.19□□□□□ -0.3
GCDH-208ENST00000588905 OR10S1Q8NGN2 331 aa13.19□□□□□ -0.3
GCDH-208ENST00000588905 IPCEF1Q8WWN9 437 aaPredicted RBP13.19□□□□□ -0.3
GCDH-208ENST00000588905 GTF3AQ92664 365 aaKnown RBP13.19□□□□□ -0.3
GCDH-208ENST00000588905 OTULINQ96BN8 352 aa13.19□□□□□ -0.3
GCDH-208ENST00000588905 DCLRE1CQ96SD1 692 aaKnown RBP13.19□□□□□ -0.3
GCDH-208ENST00000588905 GABARAPL1Q9H0R8 117 aa13.19□□□□□ -0.3
GCDH-208ENST00000588905 TUBG2Q9NRH3 451 aa13.19□□□□□ -0.3
GCDH-208ENST00000588905 COMMD3-BMI1R4GMX3 469 aa13.19□□□□□ -0.3
GCDH-208ENST00000588905 LILRA1O75019 489 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 LIPAP38571 399 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 ENTPD1P49961 510 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 ZNF81P51508 661 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 MMP15P51511 669 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 CHN2P52757 468 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 BLVRAP53004 296 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 TMEM33P57088 247 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 ESRRGP62508 458 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 CCL8P80075 99 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 ECH1Q13011 328 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 PSG7Q13046 419 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 PTGES3Q15185 160 aaKnown RBP13.18□□□□□ -0.3
GCDH-208ENST00000588905 NAA40Q86UY6 237 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 CPOQ8IVL8 374 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 OR6K6Q8NGW6 343 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 YIPF5Q969M3 257 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 COG8Q96MW5 612 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 PKP2Q99959 881 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 OR51V1Q9H2C8 321 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 CYSLTR2Q9NS75 346 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 KRT84Q9NSB2 600 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 TVP23BQ9NYZ1 205 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 TMEFF2Q9UIK5 374 aaPredicted RBP13.18□□□□□ -0.3
GCDH-208ENST00000588905 MALRD1Q5VYJ5 2156 aa13.18□□□□□ -0.3
GCDH-208ENST00000588905 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.17□□□□□ -0.38e-7■■□□□ 12.5
GCDH-208ENST00000588905 PLSCR5A0PG75 271 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 LRP5LA4QPB2 252 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 PRR23D1E9PI22 279 aaPredicted RBP13.17□□□□□ -0.3
GCDH-208ENST00000588905 GLCEO94923 617 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 SPARCP09486 303 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 ACSM4P0C7M7 580 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 PRR23D2P0DMB1 279 aaPredicted RBP13.17□□□□□ -0.3
GCDH-208ENST00000588905 PAICSP22234 425 aaKnown RBP13.17□□□□□ -0.3
GCDH-208ENST00000588905 EPHA2P29317 976 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 GSTT1P30711 240 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 GPR6P46095 362 aaPredicted RBP13.17□□□□□ -0.3
GCDH-208ENST00000588905 RGS6P49758 472 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 FAM209AQ5JX71 171 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 COLCA1Q6ZS62 124 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 DCXRQ7Z4W1 244 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 HPS1Q92902 700 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 HAVCR1Q96D42 359 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 CMBLQ96DG6 245 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 MSI2Q96DH6 328 aaKnown RBP13.17□□□□□ -0.3
GCDH-208ENST00000588905 ATF6BQ99941 703 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 MARCH7Q9H992 704 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 ZNF275Q9NSD4 429 aaPredicted RBP13.17□□□□□ -0.3
GCDH-208ENST00000588905 DECR2Q9NUI1 292 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 CGGBP1Q9UFW8 167 aaPredicted RBP13.17□□□□□ -0.3
GCDH-208ENST00000588905 OAZ3Q9UMX2 235 aa13.17□□□□□ -0.3
GCDH-208ENST00000588905 LOC100289279A0A1B0GTE1 492 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 SAC3D1A6NKF1 404 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 F5H5K5 113 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 J3QW42 95 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 TPD52L2O43399 206 aaKnown RBP13.16□□□□□ -0.3
GCDH-208ENST00000588905 RP2O75695 350 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 ZNF16P17020 682 aaPredicted RBP13.16□□□□□ -0.3
GCDH-208ENST00000588905 CRYBB2P43320 205 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 TRIP10Q15642 601 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 SNAPC1Q16533 368 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 TSTQ16762 297 aaKnown RBP13.16□□□□□ -0.3
GCDH-208ENST00000588905 ZFP1Q6P2D0 407 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 CXXC5Q7LFL8 322 aaKnown RBP13.16□□□□□ -0.3
GCDH-208ENST00000588905 TIGD4Q8IY51 512 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 BBS1Q8NFJ9 593 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 ST7LQ8TDW4 575 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 APOBEC3DQ96AK3 386 aaPredicted RBP13.16□□□□□ -0.3
GCDH-208ENST00000588905 ZMYND19Q96E35 227 aaPredicted RBP13.16□□□□□ -0.3
GCDH-208ENST00000588905 C1QTNF5Q9BXJ0 243 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 TEX12Q9BXU0 123 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 DDX28Q9NUL7 540 aaKnown RBP13.16□□□□□ -0.3
GCDH-208ENST00000588905 TMEM160Q9NX00 188 aa13.16□□□□□ -0.3
GCDH-208ENST00000588905 PURGQ9UJV8 347 aaKnown RBP13.16□□□□□ -0.3
GCDH-208ENST00000588905 IGHV1-69-2A0A0G2JMI3 117 aa13.15□□□□□ -0.3
GCDH-208ENST00000588905 ZSCAN5BA6NJL1 495 aa13.15□□□□□ -0.3
GCDH-208ENST00000588905 ZAR1LA6NP61 321 aa13.15□□□□□ -0.3
GCDH-208ENST00000588905 PPIHO43447 177 aaKnown RBP13.15□□□□□ -0.3
GCDH-208ENST00000588905 SPRY3O43610 288 aa13.15□□□□□ -0.3
GCDH-208ENST00000588905 TIMM8AO60220 97 aaPredicted RBP13.15□□□□□ -0.3
GCDH-208ENST00000588905 LMX1BO60663 402 aa13.15□□□□□ -0.3
GCDH-208ENST00000588905 CDC14BO60729 498 aa13.15□□□□□ -0.3
GCDH-208ENST00000588905 IGHV1-46P01743 117 aa13.15□□□□□ -0.3
GCDH-208ENST00000588905 ADH4P08319 380 aa13.15□□□□□ -0.3
GCDH-208ENST00000588905 KITLGP21583 273 aa13.15□□□□□ -0.3
GCDH-208ENST00000588905 SLC2A5P22732 501 aa13.15□□□□□ -0.3
GCDH-208ENST00000588905 POLR2IP36954 125 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms