RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 LYZL6O75951 148 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 UBL3O95164 117 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 ARR3P36575 388 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 CX3CR1P49238 355 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 ODF4Q2M2E3 257 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 ACSM3Q53FZ2 586 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 TMEM53Q6P2H8 277 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 TMEM91Q6ZNR0 172 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 CEACAM19Q7Z692 300 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 GABRG1Q8N1C3 465 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 KCTD7Q96MP8 289 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 DCSTAMPQ9H295 470 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 MOB1AQ9H8S9 216 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 FAM206AQ9NX38 181 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 PTTG2Q9NZH5 202 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 ZNF224Q9NZL3 707 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 SLC22A13Q9Y226 551 aa19.45■□□□□ 0.7
ATG4D-209ENST00000588857 TRGV8A0A0C4DH27 118 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 F5H5K5 113 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 SYNGR3O43761 229 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 RAD51DO75771 328 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 UGT2B10P36537 528 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 SERPINB10P48595 397 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 INSL4Q14641 139 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 P2RY6Q15077 328 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 TBRG1Q3YBR2 411 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 PABPC1L2AQ5JQF8 200 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 ZNF433Q8N7K0 673 aaPredicted RBP19.44■□□□□ 0.7
ATG4D-209ENST00000588857 IL17RDQ8NFM7 739 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 OR13C5Q8NGS8 318 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 DCLRE1CQ96SD1 692 aaKnown RBP19.44■□□□□ 0.7
ATG4D-209ENST00000588857 G6PC2Q9NQR9 355 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 A0A0G2JNJ9 132 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 OR6C6A6NF89 314 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 E9PLN8 166 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 COX5AP20674 150 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 PCSK6P29122 969 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 HTR5AP47898 357 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 ZNF121P58317 390 aaPredicted RBP19.44■□□□□ 0.7
ATG4D-209ENST00000588857 RPS11P62280 158 aaKnown RBP eCLIP19.44■□□□□ 0.7
ATG4D-209ENST00000588857 TUBA1BP68363 451 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 TMEM211Q6ICI0 200 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 PAMR1Q6UXH9 720 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 ZNF704Q6ZNC4 412 aaPredicted RBP19.44■□□□□ 0.7
ATG4D-209ENST00000588857 TUBA1AQ71U36 451 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 CCDC36Q8IYA8 594 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 PPP1R14AQ96A00 147 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 VKORC1Q9BQB6 163 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 PBOV1Q9GZY1 135 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 Q9UFV3 132 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 N6AMT1Q9Y5N5 214 aa19.44■□□□□ 0.7
ATG4D-209ENST00000588857 RTTNQ86VV8 2226 aa19.43■□□□□ 0.7
ATG4D-209ENST00000588857 GATBO75879 557 aaKnown RBP19.43■□□□□ 0.7
ATG4D-209ENST00000588857 ZNF182P17025 639 aaPredicted RBP19.43■□□□□ 0.7
ATG4D-209ENST00000588857 SLC6A9P48067 706 aa19.43■□□□□ 0.7
ATG4D-209ENST00000588857 UBE2NP61088 152 aaKnown RBP19.43■□□□□ 0.7
ATG4D-209ENST00000588857 RAB1AP62820 205 aa19.43■□□□□ 0.7
ATG4D-209ENST00000588857 GABRA6Q16445 453 aa19.43■□□□□ 0.7
ATG4D-209ENST00000588857 RDH10Q8IZV5 341 aa19.43■□□□□ 0.7
ATG4D-209ENST00000588857 C1orf162Q8NEQ5 155 aaPredicted RBP19.43■□□□□ 0.7
ATG4D-209ENST00000588857 GPR148Q8TDV2 347 aa19.43■□□□□ 0.7
ATG4D-209ENST00000588857 SLC7A6Q92536 515 aa19.43■□□□□ 0.7
ATG4D-209ENST00000588857 PIGMQ9H3S5 423 aa19.43■□□□□ 0.7
ATG4D-209ENST00000588857 ZNF629Q9UEG4 869 aaPredicted RBP19.43■□□□□ 0.7
ATG4D-209ENST00000588857 M0R135 149 aa19.42■□□□□ 0.7
ATG4D-209ENST00000588857 SC5DO75845 299 aa19.42■□□□□ 0.7
ATG4D-209ENST00000588857 ANXA2P07355 339 aaKnown RBP19.42■□□□□ 0.7
ATG4D-209ENST00000588857 BMP5P22003 454 aa19.42■□□□□ 0.7
ATG4D-209ENST00000588857 HOXC12P31275 282 aa19.42■□□□□ 0.7
ATG4D-209ENST00000588857 OTX1P32242 354 aaPredicted RBP19.42■□□□□ 0.7
ATG4D-209ENST00000588857 TPTEP56180 551 aa19.42■□□□□ 0.7
ATG4D-209ENST00000588857 PLP2Q04941 152 aa19.42■□□□□ 0.7
ATG4D-209ENST00000588857 GSG1Q2KHT4 349 aa19.42■□□□□ 0.7
ATG4D-209ENST00000588857 CXorf67Q86X51 503 aaPredicted RBP19.42■□□□□ 0.7
ATG4D-209ENST00000588857 RGP1Q92546 391 aaPredicted RBP19.42■□□□□ 0.7
ATG4D-209ENST00000588857 ZNF799Q96GE5 643 aa19.42■□□□□ 0.7
ATG4D-209ENST00000588857 OR14A2Q96R54 314 aa19.42■□□□□ 0.7
ATG4D-209ENST00000588857 NUFIP1Q9UHK0 495 aaKnown RBP19.42■□□□□ 0.7
ATG4D-209ENST00000588857 ATPIF1Q9UII2 106 aa19.42■□□□□ 0.7
ATG4D-209ENST00000588857 NBASA2RRP1 2371 aa19.42■□□□□ 0.7
ATG4D-209ENST00000588857 ACOD1A6NK06 481 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 DBHP09172 617 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 OCM2P0CE71 109 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 UBCP0CG48 685 aaKnown RBP19.41■□□□□ 0.7
ATG4D-209ENST00000588857 SLC2A1P11166 492 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 HOXB1P14653 301 aaPredicted RBP19.41■□□□□ 0.7
ATG4D-209ENST00000588857 CRYGSP22914 178 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 RSPO1Q2MKA7 263 aaPredicted RBP19.41■□□□□ 0.7
ATG4D-209ENST00000588857 ZMAT1Q5H9K5 638 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 TMEM244Q5VVB8 128 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 DRAM2Q6UX65 266 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 FAM57BQ71RH2 274 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 LUZP2Q86TE4 346 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 ELMOD2Q8IZ81 293 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 RND1Q92730 232 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 MEMO1Q9Y316 297 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 POLEQ07864 2286 aa19.41■□□□□ 0.7
ATG4D-209ENST00000588857 ZNF503-AS2A6NEH8 195 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 ZNF879B4DU55 563 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 MSTNO14793 375 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms