RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 TTLL8A6PVC2 850 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 RBBP9O75884 186 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 BGLAPP02818 100 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 CXCL2P19875 107 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 PLA2G7Q13093 441 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 ZNF766Q5HY98 468 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 OTOSQ8NHW6 89 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 SGCZQ96LD1 299 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 C5orf34Q96MH7 638 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 SYT4Q9H2B2 425 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 KIF25Q9UIL4 384 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 MRTO4Q9UKD2 239 aaKnown RBP13.02□□□□□ -0.33
CCDC43-203ENST00000588210 PYCARD-AS1I3L0S3 204 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 CTAG2O75638 210 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 SLC25A12O75746 678 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 SP1P08047 785 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 PCGF3Q3KNV8 242 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 WDR38Q5JTN6 314 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 SLC36A1Q7Z2H8 476 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 TMEM178AQ8NBL3 297 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 OR51A4Q8NGJ6 313 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 OR4C16Q8NGL9 310 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 ELMOD3Q96FG2 381 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 OR8B4Q96RC9 309 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 KLHDC3Q9BQ90 382 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 LUZP4Q9P127 313 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 KCNN3Q9UGI6 736 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 A0A1W2PPL8 197 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 H0YC42 278 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 L7N2F9 121 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 TO15178 435 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 FBXO45P0C2W1 286 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 VSIG10L2P0DP72 767 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 NAGAP17050 411 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 DLX5P56178 289 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 ZNF117Q03924 483 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 PM20D2Q8IYS1 436 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 SPACA9Q96E40 222 aaPredicted RBP13.01□□□□□ -0.33
CCDC43-203ENST00000588210 AMELYQ99218 206 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 SLC17A5Q9NRA2 495 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 KCNG2Q9UJ96 466 aa13.01□□□□□ -0.33
CCDC43-203ENST00000588210 TRAV36DV7A0A075B6V5 113 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 CIB4A0PJX0 185 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 UBE2QL1A1L167 161 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 CDC40O60508 579 aaKnown RBP eCLIP13□□□□□ -0.33
CCDC43-203ENST00000588210 ICOSLGO75144 302 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 RPS27P42677 84 aaKnown RBP13□□□□□ -0.33
CCDC43-203ENST00000588210 TOMM20Q15388 145 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 NHLRC3Q5JS37 347 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 OR5M10Q6IEU7 315 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 OR6N1Q8NGY5 312 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 TSEN15Q8WW01 171 aaKnown RBP13□□□□□ -0.33
CCDC43-203ENST00000588210 ASB17Q8WXJ9 295 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 GINS4Q9BRT9 223 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 SPENQ96T58 3664 aaKnown RBP13□□□□□ -0.33
CCDC43-203ENST00000588210 KALRNO60229 2985 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 NME2P1O60361 137 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 GPANK1O95872 356 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 NME2P22392 152 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 ABCD3P28288 659 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 SSBP1Q04837 148 aaKnown RBP13□□□□□ -0.33
CCDC43-203ENST00000588210 SLC17A1Q14916 467 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 C3P1Q6ZMU1 363 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 MDGA2Q7Z553 956 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 ADGRG3Q86Y34 549 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 PCNPQ8WW12 178 aaKnown RBP13□□□□□ -0.33
CCDC43-203ENST00000588210 SFXN2Q96NB2 322 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 ADOQ96SZ5 270 aa13□□□□□ -0.33
CCDC43-203ENST00000588210 KLF13Q9Y2Y9 288 aaPredicted RBP13□□□□□ -0.33
CCDC43-203ENST00000588210 SPTA1P02549 2419 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 MCRIP1C9JLW8 97 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 SLC17A2O00624 439 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 XKRYO14609 159 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 MT-ATP6P00846 226 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 HRGP04196 525 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 ZNF250P15622 560 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 NFYAP23511 347 aaPredicted RBP12.99□□□□□ -0.33
CCDC43-203ENST00000588210 CXCR1P25024 350 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 POU3F4P49335 361 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 CENPAP49450 140 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 EFNB2P52799 333 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 RAB11BQ15907 218 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 FAM166AQ6J272 317 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 NHLRC1Q6VVB1 395 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 MAMDC2Q7Z304 686 aaPredicted RBP12.99□□□□□ -0.33
CCDC43-203ENST00000588210 GALNTL5Q7Z4T8 443 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 OR51D1Q8NGF3 324 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 OR52B4Q8NGK2 314 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 ZNF519Q8TB69 540 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 RNF128Q8TEB7 428 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 HES7Q9BYE0 225 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 RTN4RQ9BZR6 473 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 ELOVL3Q9HB03 270 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 ING1Q9UK53 422 aaPredicted RBP12.99□□□□□ -0.33
CCDC43-203ENST00000588210 B9D1Q9UPM9 204 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 PCNX3Q9H6A9 2034 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 EXPH5Q8NEV8 1989 aa12.99□□□□□ -0.33
CCDC43-203ENST00000588210 LOC100289279A0A1B0GTE1 492 aa12.98□□□□□ -0.33
CCDC43-203ENST00000588210 LOC105371267A0A1B0GV96 52 aa12.98□□□□□ -0.33
CCDC43-203ENST00000588210 A0A1W2PQD3 144 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms