RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 SUMO3P55854 103 aaPredicted RBP8.66□□□□□ -1.02
LINC01539-201ENST00000587904 MRPS11P82912 194 aaKnown RBP8.66□□□□□ -1.02
LINC01539-201ENST00000587904 MPPED2Q15777 294 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 ZNF74Q16587 644 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 SHISA6Q6ZSJ9 500 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 Q6ZTK2 550 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 ACBD7Q8N6N7 88 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 SYT14Q8NB59 555 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 ZNF485Q8NCK3 441 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 BBS1Q8NFJ9 593 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 C1GALT1C1Q96EU7 318 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 C14orf79Q96F83 325 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 ALG8Q9BVK2 526 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 HIF3AQ9Y2N7 669 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 NPFFR2Q9Y5X5 522 aa8.66□□□□□ -1.02
LINC01539-201ENST00000587904 CDC14CA4D256 554 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 NAP1L6A6NFF2 107 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 FAM183AA6NL82 134 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 NDUFS8O00217 210 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 SPARCP09486 303 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 METTL15P1P0C7V9 234 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 GP1BBP13224 206 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 ZNF25P17030 456 aaPredicted RBP8.65□□□□□ -1.02
LINC01539-201ENST00000587904 CCKBRP32239 447 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 PRKXP51817 358 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 DLX5P56178 289 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 LSM6P62312 80 aaKnown RBP8.65□□□□□ -1.02
LINC01539-201ENST00000587904 ACTC1P68032 377 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 ACTA1P68133 377 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 PITPNAQ00169 270 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 CRMP1Q14194 572 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 ELFN2Q5R3F8 820 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 PAQR6Q6TCH4 344 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 CLEC9AQ6UXN8 241 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 GLDNQ6ZMI3 551 aaPredicted RBP8.65□□□□□ -1.02
LINC01539-201ENST00000587904 TMEM200AQ86VY9 491 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 SIAH3Q8IW03 269 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 SIRT6Q8N6T7 355 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 OR5R1Q8NH85 324 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 KISS1RQ969F8 398 aaPredicted RBP8.65□□□□□ -1.02
LINC01539-201ENST00000587904 ARL11Q969Q4 196 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 PIGQQ9BRB3 760 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 FKRPQ9H9S5 495 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 APMAPQ9HDC9 416 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 MMP25Q9NPA2 562 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 NRIP3Q9NQ35 241 aa8.65□□□□□ -1.02
LINC01539-201ENST00000587904 MRPS18CQ9Y3D5 142 aaKnown RBP8.65□□□□□ -1.02
LINC01539-201ENST00000587904 SPIN1Q9Y657 262 aaPredicted RBP8.65□□□□□ -1.02
LINC01539-201ENST00000587904 LOC102723996A0A087X1L8 192 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 IGHV3-20A0A0C4DH32 117 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 TRBV11-1A0A0K0K1C0 115 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 C9J4A7 227 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 LRRTM2O43300 516 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 HSPA12AO43301 675 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 IFNA17P01571 189 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 GALP22466 123 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 CXCR1P25024 350 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 TACR3P29371 465 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 RPL4P36578 427 aaKnown RBP8.65□□□□□ -1.03
LINC01539-201ENST00000587904 RPS25P62851 125 aaKnown RBP8.65□□□□□ -1.03
LINC01539-201ENST00000587904 IL10RAQ13651 578 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 GGTLC2Q14390 218 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 RSU1Q15404 277 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 NKPD1Q17RQ9 610 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 TMEM95Q3KNT9 176 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 CFAP161Q6P656 301 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 UNQ6494/PRO21346Q6UXR6 183 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 ZNF813Q6ZN06 617 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 MARCH3Q86UD3 253 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 CCDC54Q8NEL0 328 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 OR4F15Q8NGB8 312 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 OR51G2Q8NGK0 314 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 RNF138Q8WVD3 245 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 FBXO17Q96EF6 278 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 UTP23Q9BRU9 249 aaKnown RBP8.65□□□□□ -1.03
LINC01539-201ENST00000587904 ZNF649Q9BS31 505 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 MFFQ9GZY8 342 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 ZNF69Q9UC07 566 aa8.65□□□□□ -1.03
LINC01539-201ENST00000587904 GDF2Q9UK05 429 aaPredicted RBP8.65□□□□□ -1.03
LINC01539-201ENST00000587904 ASCC3Q8N3C0 2202 aaKnown RBP8.64□□□□□ -1.03
LINC01539-201ENST00000587904 EXPH5Q8NEV8 1989 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 TRAV36DV7A0A075B6V5 113 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 FXYD6-FXYD2A0A087WZ82 144 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 FGF16O43320 207 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 GSTZ1O43708 216 aaPredicted RBP8.64□□□□□ -1.03
LINC01539-201ENST00000587904 CREBL2O60519 120 aaPredicted RBP8.64□□□□□ -1.03
LINC01539-201ENST00000587904 ZFAND5O76080 213 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 MT-ATP6P00846 226 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 OPN1LWP04000 364 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 ASAH2BP0C7U1 165 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 RAB5AP20339 215 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 NFYBP25208 207 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 ITPKBP27987 946 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 BDKRB2P30411 391 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 GLP1RP43220 463 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 MMP15P51511 669 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 MECP2P51608 486 aaKnown RBP8.64□□□□□ -1.03
LINC01539-201ENST00000587904 POLR2HP52434 150 aaKnown RBP8.64□□□□□ -1.03
LINC01539-201ENST00000587904 SOX8P57073 446 aa8.64□□□□□ -1.03
LINC01539-201ENST00000587904 SURF2Q15527 256 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms