RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 PLSCR2Q9NRY7 297 aa17.42■□□□□ 0.38
TRIM47-204ENST00000587339 A0A0B4J203 849 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 ISPDA4D126 451 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 TALDO1P37837 337 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 RAB35Q15286 201 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 STK11Q15831 433 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 FAM57BQ71RH2 274 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 OR8H2Q8N162 312 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 UBE2J2Q8N2K1 259 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 OR8B12Q8NGG6 310 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 OR51E1Q8TCB6 317 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 C14orf119Q9NWQ9 140 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 MALT1Q9UDY8 824 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 SPATA2Q9UM82 520 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 FOXJ3Q9UPW0 622 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 NCOA6Q14686 2063 aaPredicted RBP17.41■□□□□ 0.38
TRIM47-204ENST00000587339 A0A1B0GVI7 797 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 K7EM74 188 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 RRP8O43159 456 aaKnown RBP17.41■□□□□ 0.38
TRIM47-204ENST00000587339 APOC1P02654 83 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF32P17041 273 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 AGTR1P30556 359 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 OTX1P32242 354 aaPredicted RBP17.41■□□□□ 0.38
TRIM47-204ENST00000587339 SLC6A9P48067 706 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 PCBD1P61457 104 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 MADCAM1Q13477 382 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 IL18Q14116 193 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 ASPHD2Q6ICH7 369 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 ABHD12BQ7Z5M8 362 aaPredicted RBP17.41■□□□□ 0.38
TRIM47-204ENST00000587339 ADGRE4PQ86SQ3 457 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 COMMD2Q86X83 199 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 SKA3Q8IX90 412 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 OR5H6Q8NGV6 325 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 CHPT1Q8WUD6 406 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 SPTSSAQ969W0 71 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 LIN7BQ9HAP6 207 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 CYSLTR2Q9NS75 346 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 EXTL2Q9UBQ6 330 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 TIMM10BQ9Y5J6 103 aa17.41■□□□□ 0.38
TRIM47-204ENST00000587339 URB1O60287 2271 aaKnown RBP17.4■□□□□ 0.38
TRIM47-204ENST00000587339 APC2O95996 2303 aa17.4■□□□□ 0.38
TRIM47-204ENST00000587339 EIF4EP06730 217 aaKnown RBP17.4■□□□□ 0.38
TRIM47-204ENST00000587339 FSTP19883 344 aa17.4■□□□□ 0.38
TRIM47-204ENST00000587339 ARF1P84077 181 aaKnown RBP17.4■□□□□ 0.38
TRIM47-204ENST00000587339 PYDC2Q56P42 97 aa17.4■□□□□ 0.38
TRIM47-204ENST00000587339 PRSS45Q7RTY3 260 aa17.4■□□□□ 0.38
TRIM47-204ENST00000587339 RBMXL3Q8N7X1 1067 aaKnown RBP17.4■□□□□ 0.38
TRIM47-204ENST00000587339 GDPD1Q8N9F7 314 aa17.4■□□□□ 0.38
TRIM47-204ENST00000587339 GMPPAQ96IJ6 420 aaPredicted RBP17.4■□□□□ 0.38
TRIM47-204ENST00000587339 SOSTQ9BQB4 213 aa17.4■□□□□ 0.38
TRIM47-204ENST00000587339 C12orf49Q9H741 205 aa17.4■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF275Q9NSD4 429 aaPredicted RBP17.4■□□□□ 0.38
TRIM47-204ENST00000587339 TAS2R4Q9NYW5 299 aa17.4■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF319Q9P2F9 582 aa17.4■□□□□ 0.38
TRIM47-204ENST00000587339 M0R135 149 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 ZNHIT1O43257 154 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 PATE4P0C8F1 98 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 FAPQ12884 760 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 ECH1Q13011 328 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 RSPO1Q2MKA7 263 aaPredicted RBP17.39■□□□□ 0.37
TRIM47-204ENST00000587339 C9orf135Q5VTT2 229 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 ZNF774Q6NX45 483 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 NAA40Q86UY6 237 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 LGALS14Q8TCE9 139 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 SLC7A6Q92536 515 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 ZNF799Q96GE5 643 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 PGAM5Q96HS1 289 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 TRIB1Q96RU8 372 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 MRI1Q9BV20 369 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 PPP1R3EQ9H7J1 279 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 CLCF1Q9UBD9 225 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 CEP295Q9C0D2 2601 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 MGAQ8IWI9 3026 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 A0A1B0GTI1 187 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 K7ENP7 123 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 SYNGR3O43761 229 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 LMX1BO60663 402 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 APOA1P02647 267 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 DBHP09172 617 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 IGFBP3P17936 291 aaPredicted RBP17.39■□□□□ 0.37
TRIM47-204ENST00000587339 PTBP1P26599 531 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRIM47-204ENST00000587339 CLDN12P56749 244 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 PSG4Q00888 419 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 INO80CQ6PI98 192 aaPredicted RBP17.39■□□□□ 0.37
TRIM47-204ENST00000587339 DCDC5Q6ZRR9 648 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 SERPINA12Q8IW75 414 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 CENPSQ8N2Z9 138 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 OR5M9Q8NGP3 310 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 FGGYQ96C11 551 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 WACQ9BTA9 647 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 GPR84Q9NQS5 396 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 GLRX2Q9NS18 164 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 DKK4Q9UBT3 224 aa17.39■□□□□ 0.37
TRIM47-204ENST00000587339 P2RY14Q15391 338 aa17.38■□□□□ 0.37
TRIM47-204ENST00000587339 BAK1Q16611 211 aa17.38■□□□□ 0.37
TRIM47-204ENST00000587339 TRIM16LQ309B1 348 aa17.38■□□□□ 0.37
TRIM47-204ENST00000587339 GFOD2Q3B7J2 385 aa17.38■□□□□ 0.37
TRIM47-204ENST00000587339 OR1F12Q8NHA8 337 aa17.38■□□□□ 0.37
TRIM47-204ENST00000587339 ABHD17AQ96GS6 310 aa17.38■□□□□ 0.37
TRIM47-204ENST00000587339 OR2H1Q9GZK4 316 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms