RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 SLC38A10Q9HBR0 1119 aa5□□□□□ -1.61
TPM4-203ENST00000586193 EML4Q9HC35 981 aaKnown RBP5□□□□□ -1.61
TPM4-203ENST00000586193 TREM2Q9NZC2 230 aa5□□□□□ -1.61
TPM4-203ENST00000586193 HYOU1Q9Y4L1 999 aa5□□□□□ -1.61
TPM4-203ENST00000586193 RANBP2P49792 3224 aaKnown RBP5□□□□□ -1.61
TPM4-203ENST00000586193 ZNF236Q9UL36 1845 aa5□□□□□ -1.61
TPM4-203ENST00000586193 ADGRA3Q8IWK6 1321 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 LAMA3Q16787 3333 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 PLXNA1Q9UIW2 1896 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 CENPXA8MT69 81 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 BTNL10A8MVZ5 291 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 PLPP1O14494 284 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 RFXANKO14593 260 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 KBTBD11O94819 623 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 LYPLA2O95372 231 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 SLC25A27O95847 323 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 CYBAP13498 195 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 SPAM1P38567 509 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 SLC26A2P50443 739 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 MAP3K7CLP57077 242 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 STXBP1P61764 594 aaKnown RBP4.99□□□□□ -1.61
TPM4-203ENST00000586193 CKAP4Q07065 602 aaKnown RBP4.99□□□□□ -1.61
TPM4-203ENST00000586193 RUNX3Q13761 415 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 GGTLC2Q14390 218 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 SPA17Q15506 151 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 TGIF1Q15583 401 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 USF2Q15853 346 aaPredicted RBP4.99□□□□□ -1.61
TPM4-203ENST00000586193 EXOC3L4Q17RC7 722 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 LRRC26Q2I0M4 334 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 PGGHGQ32M88 737 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 OLFML2AQ68BL7 652 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 USP43Q70EL4 1123 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 PID1Q7Z2X4 250 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 NAXDQ8IW45 347 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 C6orf223Q8N319 242 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 RNF10Q8N5U6 811 aaKnown RBP4.99□□□□□ -1.61
TPM4-203ENST00000586193 Q8N9P0 234 aaPredicted RBP4.99□□□□□ -1.61
TPM4-203ENST00000586193 NDRG1Q92597 394 aaKnown RBP4.99□□□□□ -1.61
TPM4-203ENST00000586193 OR5M11Q96RB7 305 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 LRRC61Q9BV99 259 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 HES7Q9BYE0 225 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 SELENOIQ9C0D9 397 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 PRO3102Q9H379 93 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 DCDC2Q9UHG0 476 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 GGA2Q9UJY4 613 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 ZNF256Q9Y2P7 627 aaPredicted RBP4.99□□□□□ -1.61
TPM4-203ENST00000586193 GOLT1BQ9Y3E0 138 aa4.99□□□□□ -1.61
TPM4-203ENST00000586193 LAMA2P24043 3122 aaKnown RBP4.99□□□□□ -1.61
TPM4-203ENST00000586193 COL6A3P12111 3177 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 IGHV3OR16-10A0A075B7F0 116 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 ANKRD63C9JTQ0 380 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 F8VZ95 297 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 SCAMP2O15127 329 aaKnown RBP4.98□□□□□ -1.61
TPM4-203ENST00000586193 PGAM2P15259 253 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 TCP1P17987 556 aaKnown RBP4.98□□□□□ -1.61
TPM4-203ENST00000586193 RFC3P40938 356 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 HTR2BP41595 481 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 ACVR1Q04771 509 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 ELAVL2Q12926 359 aaKnown RBP4.98□□□□□ -1.61
TPM4-203ENST00000586193 ART3Q13508 389 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 ASAH1Q13510 395 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 VAMP3Q15836 100 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 PSMD5Q16401 504 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 WDR74Q6RFH5 385 aaPredicted RBP4.98□□□□□ -1.61
TPM4-203ENST00000586193 TFAP2EQ6VUC0 442 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 ZNF621Q6ZSS3 439 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 SLC35D2Q76EJ3 337 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 C12orf56Q8IXR9 622 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 OR10H4Q8NGA5 316 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 ANGPTL6Q8NI99 470 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 TFGQ92734 400 aaPredicted RBP4.98□□□□□ -1.61
TPM4-203ENST00000586193 RNF170Q96K19 258 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 TRNT1Q96Q11 434 aaKnown RBP4.98□□□□□ -1.61
TPM4-203ENST00000586193 MAP1LC3CQ9BXW4 147 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 KIR3DX1Q9H7L2 352 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 SIAEQ9HAT2 523 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 PARVGQ9HBI0 331 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 SCRT2Q9NQ03 307 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 XPNPEP1Q9NQW7 623 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 UBAP1Q9NZ09 502 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 STX18Q9P2W9 335 aaKnown RBP4.98□□□□□ -1.61
TPM4-203ENST00000586193 KIF25Q9UIL4 384 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 KLHL21Q9UJP4 597 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 DNAJC12Q9UKB3 198 aa4.98□□□□□ -1.61
TPM4-203ENST00000586193 MYH9P35579 1960 aaKnown RBP4.97□□□□□ -1.61
TPM4-203ENST00000586193 IGHV1OR15-1A0A075B7D0 117 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 ZNF816-ZNF321PA0A0X1KG74 233 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 TSPAN11A1L157 253 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 GOLGA8IPA6NC78 632 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 SLC22A20A6NK97 555 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 IFITM10A6NMD0 228 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 GOLGA8JA6NMD2 632 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 F6UB75 175 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 SLC16A4O15374 487 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 XRCC2O43543 280 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 EIF3GO75821 320 aaKnown RBP eCLIP4.97□□□□□ -1.61
TPM4-203ENST00000586193 DUSP14O95147 198 aaKnown RBP4.97□□□□□ -1.61
TPM4-203ENST00000586193 LSM8O95777 96 aaKnown RBP4.97□□□□□ -1.61
TPM4-203ENST00000586193 HBE1P02100 147 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms