RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ISG15P05161 165 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 COX5BP10606 129 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 GRNP28799 593 aaKnown RBP11.06□□□□□ -0.64
VMP1-202ENST00000585847 CRYBB2P43320 205 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 MTNR1BP49286 362 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 ROR2Q01974 943 aaKnown RBP11.06□□□□□ -0.64
VMP1-202ENST00000585847 ALKBH1Q13686 389 aaKnown RBP11.06□□□□□ -0.64
VMP1-202ENST00000585847 RAB35Q15286 201 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 ETFDHQ16134 617 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 SLC25A35Q3KQZ1 300 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 FBXL19-AS1Q494R0 122 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 TP53I3Q53FA7 332 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 ARL9Q6T311 187 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 SSX6Q7RTT6 188 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 LUZP2Q86TE4 346 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 GABRG1Q8N1C3 465 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 C17orf78Q8N4C9 275 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 GPR148Q8TDV2 347 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 NABP1Q96AH0 204 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 PGLYRP3Q96LB9 341 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 C4orf45Q96LM5 186 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 DCLRE1CQ96SD1 692 aaKnown RBP11.06□□□□□ -0.64
VMP1-202ENST00000585847 TSC22D3Q99576 134 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 CHCHD6Q9BRQ6 235 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 MRI1Q9BV20 369 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 DCSTAMPQ9H295 470 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 ELOVL3Q9HB03 270 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 OBP2BQ9NPH6 170 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 NPDC1Q9NQX5 325 aaPredicted RBP11.06□□□□□ -0.64
VMP1-202ENST00000585847 TIMM10BQ9Y5J6 103 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 LHFPL6Q9Y693 200 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 ANKRD17O75179 2603 aaKnown RBP11.05□□□□□ -0.64
VMP1-202ENST00000585847 IGKV1D-43A0A0B4J1Z2 117 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 TRAV1-2A0A0B4J238 106 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 LOC100506127A0A0U1RQW1 187 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 C19orf84I3L1E1 186 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 LALBAP00709 142 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 CD2P06729 351 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 MYL9P24844 172 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 HSD11B1P28845 292 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 CCKARP32238 428 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 ARR3P36575 388 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 PSMD7P51665 324 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 P2RY6Q15077 328 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 TAF13Q15543 124 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 CEACAM16Q2WEN9 425 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 TMEM244Q5VVB8 128 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 ANKRD16Q6P6B7 361 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 SLC22A24Q8N4F4 322 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 OR52H1Q8NGJ2 320 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 OR2G2Q8NGZ5 317 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 OR5AK2Q8NH90 309 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 GHSRQ92847 366 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 ZNF837Q96EG3 531 aaPredicted RBP11.05□□□□□ -0.64
VMP1-202ENST00000585847 ALKBH3Q96Q83 286 aaPredicted RBP11.05□□□□□ -0.64
VMP1-202ENST00000585847 ATF6BQ99941 703 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 ZNF416Q9BWM5 594 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 SLITRK2Q9H156 845 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 RGCCQ9H4X1 137 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 EXOSC4Q9NPD3 245 aaKnown RBP11.05□□□□□ -0.64
VMP1-202ENST00000585847 TXNL4BQ9NX01 149 aaKnown RBP11.05□□□□□ -0.64
VMP1-202ENST00000585847 GALNT8Q9NY28 637 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 SLCO1C1Q9NYB5 712 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 NUFIP1Q9UHK0 495 aaKnown RBP11.05□□□□□ -0.64
VMP1-202ENST00000585847 LRP12Q9Y561 859 aa11.05□□□□□ -0.64
VMP1-202ENST00000585847 A0A1W2PPW3 197 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 OR6C6A6NF89 314 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 EEF1E1-BLOC1S5C9J1V9 151 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 LOC110117498-PIK3R3F6TDL0 507 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 PDCD5O14737 125 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 EEF1E1O43324 174 aaKnown RBP11.04□□□□□ -0.64
VMP1-202ENST00000585847 UBL3O95164 117 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 ATE1O95260 518 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 ITGA5P08648 1049 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 COX5AP20674 150 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 ACHEP22303 614 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 IGHV1-2P23083 117 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 OTX1P32242 354 aaPredicted RBP11.04□□□□□ -0.64
VMP1-202ENST00000585847 ASCL1P50553 236 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 FAM27E3Q08E93 113 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 ENDOGQ14249 297 aaKnown RBP11.04□□□□□ -0.64
VMP1-202ENST00000585847 SGCAQ16586 387 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 Q499Y3 187 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 ELFN2Q5R3F8 820 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 BCL2L15Q5TBC7 163 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 OR7E24Q6IFN5 339 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 LYPD4Q6UWN0 246 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 DRAM2Q6UX65 266 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 ZNF813Q6ZN06 617 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 Q6ZT83 130 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 SLC16A14Q7RTX9 510 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 RFLNBQ8N5W9 214 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 ZNF676Q8N7Q3 588 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 ACBD4Q8NC06 268 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 ABHD4Q8TB40 342 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 DYNC2LI1Q8TCX1 351 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 CA5BP1Q8WTZ4 195 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
VMP1-202ENST00000585847 C10orf35Q96D05 121 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 KCNJ15Q99712 375 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms