RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 MRGBPQ9NV56 204 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 CMTM6Q9NX76 183 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 SIGLEC7Q9Y286 467 aa12.05□□□□□ -0.48
SDF2-202ENST00000585428 IGHV3-64DA0A0J9YX35 117 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 LRRC30A6NM36 301 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 HMGB1P1B2RPK0 211 aaPredicted RBP12.04□□□□□ -0.48
SDF2-202ENST00000585428 TNFRSF13BO14836 293 aaPredicted RBP12.04□□□□□ -0.48
SDF2-202ENST00000585428 KNG1P01042 644 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 CDKN2AP42771 156 aaKnown RBP12.04□□□□□ -0.48
SDF2-202ENST00000585428 GPR4P46093 362 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 PITPNBP48739 271 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 FGF12P61328 243 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 KRTAP27-1Q3LI81 207 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 WDR25Q64LD2 544 aaPredicted RBP12.04□□□□□ -0.48
SDF2-202ENST00000585428 GPR139Q6DWJ6 353 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 PTCHD4Q6ZW05 846 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 CBLL1Q75N03 491 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 NLRC3Q7RTR2 1065 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 C1orf87Q8N0U7 546 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 CELF2-AS1Q8N7Q2 184 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 GJC3Q8NFK1 279 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 OR8B3Q8NGG8 313 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 Q8TCH9 128 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 SLC7A13Q8TCU3 470 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 WFDC12Q8WWY7 111 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 OR8B2Q96RD0 313 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 GPX7Q96SL4 187 aaPredicted RBP12.04□□□□□ -0.48
SDF2-202ENST00000585428 COQ7Q99807 217 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 CDADC1Q9BWV3 514 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 ANKRD19PQ9H560 264 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 C1RLQ9NZP8 487 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 GMPR2Q9P2T1 348 aaKnown RBP12.04□□□□□ -0.48
SDF2-202ENST00000585428 CLN8Q9UBY8 286 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 LHFPL6Q9Y693 200 aa12.04□□□□□ -0.48
SDF2-202ENST00000585428 C3orf80F5H4A9 247 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 DCTN6O00399 190 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 PHYHO14832 338 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 NDUFB2O95178 105 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 NDUFA7O95182 113 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 TXNDC12O95881 172 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 HLA-DPB1P04440 258 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 SELEP16581 610 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 FPR3P25089 353 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 FXYD6P3P58550 94 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 KRR1Q13601 381 aaKnown RBP12.03□□□□□ -0.48
SDF2-202ENST00000585428 OLFML2AQ68BL7 652 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 FIP1L1Q6UN15 594 aaKnown RBP12.03□□□□□ -0.48
SDF2-202ENST00000585428 DCDC5Q6ZRR9 648 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 RHOUQ7L0Q8 258 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 RRM2BQ7LG56 351 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 SLC15A3Q8IY34 581 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 TMEM86BQ8N661 226 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 OR4F5Q8NH21 305 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 ERGIC1Q969X5 290 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 RERGLQ9H628 205 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 IER3IP1Q9Y5U9 82 aa12.03□□□□□ -0.48
SDF2-202ENST00000585428 A0A0G2JK05 382 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 A0A1W2PRQ8 180 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 C22orf46C9J442 243 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 CRYBA1P05813 215 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 LIPFP07098 398 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 MMP9P14780 707 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 OMPP47874 163 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 RAD23AP54725 363 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 RAG2P55895 527 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 KRTAP10-3P60369 221 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 COX10Q12887 443 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 DGCR6Q14129 220 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 GK2Q14410 553 aaPredicted RBP12.02□□□□□ -0.49
SDF2-202ENST00000585428 MAPRE2Q15555 327 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 IFI44LQ53G44 452 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 CLEC12AQ5QGZ9 265 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 GPR157Q5UAW9 335 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 DPY19L2P2Q6ZN68 376 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 ADCK1Q86TW2 530 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 NAA40Q86UY6 237 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 BHLHE23Q8NDY6 225 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 FAM71F1Q96KD3 344 aaPredicted RBP12.02□□□□□ -0.49
SDF2-202ENST00000585428 TSSK2Q96PF2 358 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 CHIAQ9BZP6 476 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 HDHD2Q9H0R4 259 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 WDR76Q9H967 626 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 TMEM5Q9Y2B1 443 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 AP3M1Q9Y2T2 418 aa12.02□□□□□ -0.49
SDF2-202ENST00000585428 CMYA5Q8N3K9 4069 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 CENPVL3A0A0U1RRI6 287 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 CLPSL1A2RUU4 121 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 SOCS2O14508 198 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 PPP1R3DO95685 299 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 ZNF682O95780 498 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 MELTFP08582 738 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 ACSM4P0C7M7 580 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 CD200P41217 278 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 NPY4RP50391 375 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 MPPED2Q15777 294 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 MEP1BQ16820 701 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 CORO6Q6QEF8 472 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 C17orf107Q6ZR85 190 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 FKBP9P1Q75LS8 142 aa12.01□□□□□ -0.49
SDF2-202ENST00000585428 OR6V1Q8N148 313 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms