RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 SLC2A5P22732 501 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 GSTT1P30711 240 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 NR4A2P43354 598 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 EFNB1P98172 346 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 RIN1Q13671 783 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 ALKBH6Q3KRA9 238 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 FAM209AQ5JX71 171 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 SLC35D3Q5M8T2 416 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 PLBD1Q6P4A8 553 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 TMEM154Q6P9G4 183 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 RHOUQ7L0Q8 258 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 DCXRQ7Z4W1 244 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 CPOQ8IVL8 374 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 TIGD4Q8IY51 512 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 ZNF540Q8NDQ6 660 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 SEMA6AQ9H2E6 1030 aa13.86□□□□□ -0.19
ERBB2-222ENST00000584908 FN1P02751 2386 aaKnown RBP13.85□□□□□ -0.19
ERBB2-222ENST00000584908 ZAR1LA6NP61 321 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 EPHA2P29317 976 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 MAGEB1P43366 347 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 ZNF81P51508 661 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 TPTEP56180 551 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 SLX4IPQ5VYV7 408 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 MAPK1IP1LQ8NDC0 245 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 RDH5Q92781 318 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 PLEKHA8Q96JA3 519 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 RAB3IPQ96QF0 476 aaPredicted RBP13.85□□□□□ -0.19
ERBB2-222ENST00000584908 DIRC2Q96SL1 478 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 INTS14Q96SY0 518 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 PRRG3Q9BZD7 231 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 PURGQ9UJV8 347 aaKnown RBP13.85□□□□□ -0.19
ERBB2-222ENST00000584908 ZDHHC8Q9ULC8 765 aa13.85□□□□□ -0.19
ERBB2-222ENST00000584908 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.85□□□□□ -0.194e-7■■■■■ 26.8
ERBB2-222ENST00000584908 PLSCR5A0PG75 271 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 ZSCAN5BA6NJL1 495 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 F5H5K5 113 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 M0R135 149 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 IGHV1-46P01743 117 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 CD55P08174 381 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 SPARCP09486 303 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 ACHEP22303 614 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 USF1P22415 310 aaPredicted RBP13.84□□□□□ -0.19
ERBB2-222ENST00000584908 IGFBP5P24593 272 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 SNAPC1Q16533 368 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 ZMAT1Q5H9K5 638 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 C12orf73Q69YU5 71 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 CXXC5Q7LFL8 322 aaKnown RBP13.84□□□□□ -0.19
ERBB2-222ENST00000584908 SHFQ7M4L6 423 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 DPY19L4Q7Z388 723 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 GTF3AQ92664 365 aaKnown RBP13.84□□□□□ -0.19
ERBB2-222ENST00000584908 SPTSSAQ969W0 71 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 CMBLQ96DG6 245 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 SLAMF6Q96DU3 332 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 ZNF799Q96GE5 643 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 CIB1Q99828 191 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 PKP2Q99959 881 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 GABARAPL3Q9BY60 117 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 BPESC1Q9GZL8 116 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 OR51V1Q9H2C8 321 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 CHODLQ9H9P2 273 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 TVP23BQ9NYZ1 205 aa13.84□□□□□ -0.19
ERBB2-222ENST00000584908 SONP18583 2426 aaKnown RBP13.83□□□□□ -0.2
ERBB2-222ENST00000584908 ABCA2Q9BZC7 2435 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 ZNF878C9JN71 531 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 RP2O75695 350 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 TACSTD2P09758 323 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 COL8A2P25067 703 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 CCL8P80075 99 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 CDK5R2Q13319 367 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 DRAM2Q6UX65 266 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 NAA40Q86UY6 237 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 ERI1Q8IV48 349 aaKnown RBP13.83□□□□□ -0.2
ERBB2-222ENST00000584908 BBS1Q8NFJ9 593 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 RNF133Q8WVZ7 376 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 OTULINQ96BN8 352 aa13.83□□□□□ -0.2
ERBB2-222ENST00000584908 ZMYND19Q96E35 227 aaPredicted RBP13.83□□□□□ -0.2
ERBB2-222ENST00000584908 RBM4BQ9BQ04 359 aaKnown RBP13.83□□□□□ -0.2
ERBB2-222ENST00000584908 A0A1B0GWJ7 208 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 LYNX1G3V0Z9 82 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 PRKYO43930 277 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 TIMM8AO60220 97 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-222ENST00000584908 LYNX1P0DP58 116 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 CRYBB2P43320 205 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 RIPPLY3P57055 190 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 TMEM33P57088 247 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 HLXQ14774 488 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-222ENST00000584908 CARTPTQ16568 116 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 TMEM249Q2WGJ8 235 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 Q6ZR03 302 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 ZNF454Q8N9F8 522 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 OR6N2Q8NGY6 317 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 OTOSQ8NHW6 89 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 YIPF5Q969M3 257 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 KCNJ15Q99712 375 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 ABHD6Q9BV23 337 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 TOR3AQ9H497 397 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 USE1Q9NZ43 259 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 PTTG3PQ9NZH4 202 aa13.82□□□□□ -0.2
ERBB2-222ENST00000584908 NAV3Q8IVL0 2385 aa13.81□□□□□ -0.2
ERBB2-222ENST00000584908 IGHV4-61A0A0C4DH41 118 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms